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<!-- badges: start --> [![R-CMD-check-bioc](]( [![Codecov test coverage](]( <!-- badges: end --> # R package: msqrob2 ## Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure The `msqrob2` package ports and modernises the method presented in [`MSqRob`]( and [`MSqRobSum`]( to use the [`QFeatures`]( class infrastructure. ## Installation To install the current version of *msqrob2*, run. ``` if(!requireNamespace("BiocManager", quietly = TRUE)) { install.packages("BiocManager") } BiocManager::install("statOmics/msqrob2") ``` The dependencies of the package are listed in the DESCRIPTION file of the package. ## Issues and bug reports Please use to submit issues, bug reports, and comments. ## Usage See vignettes on [msqrob2Examples](