SQUID - a library of functions for biological sequence analysis Copyright (C) 1992-2002 Washington University School of Medicine All Rights Reserved This suite of programs is free software. You can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. In other words, you are free to modify, copy, or redistribute this source code and its documentation in any way you like, but you must distribute all derivative versions as free software under the same terms that I've provided my code to you (i.e. the GNU General Public License). This precludes any use of the code in proprietary or commercial software unless your source code is made freely available. If you wish to use SQUID code under a different Open Source license that's not compatible with the GPL (like the Artistic License, BSD license, or the Netscape Public License), please contact me (email@example.com) for permission. Incorporation into commercial software under non-GPL terms is possible, by arranging a license with the Washington University School of Medicine Center for Technology Management (CTM). For this purpose, the CTM is authorized to negotiate on behalf of the Howard Hughes Medical Institute, the other copyright holder on the code. Certain third party code modules may have to be removed from a non-GPL distribution. Contact Jack Pincus (firstname.lastname@example.org) to arrange non-GPL licensing terms. This software is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this HMMER release, in the file LICENSE; if not, write to the Free Software Foundation, Inc., 675 Mass. Ave, Cambridge, MA 02139 USA.