Graph ofmdp
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  • 1eb2baf (HEAD -> master, origin/master, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:17:39 -0400;
  • 8d8910a (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:17:39 -0400;
  • f5a14eb bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:48:47 +0000;
  • 2bbab02 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:48:47 +0000;
  • 5881f71 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:44:09 +0000;
  • a3d72f8 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:44:09 +0000;
  • 10882a8 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:35:13 +0000;
  • 51bbb72 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:35:13 +0000;
  • dc555be bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:34:47 -0400;
  • 048cca6 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:34:47 -0400;
  • 25fa901 Fix problem to calculate MDP score for pathways by Andre Nicolau <anicolau85@gmail.com> 2020-10-23 18:54:13 -0300;
  • 843d6fa Add BiocManger in Suggest field at DESCRIPTION file by Andre Nicolau <anicolau85@gmail.com> 2020-10-23 16:19:59 -0300;
  • 0b1799a Fix DESCRIPTION file by Andre Nicolau <anicolau85@gmail.com> 2020-10-23 16:15:10 -0300;
  • b0cad0c Increase patch number version by Andre Nicolau <anicolau85@gmail.com> 2020-10-20 11:15:02 -0300;
  • 9ccaa9c Change R version dependency by Andre Nicolau <anicolau85@gmail.com> 2020-10-20 11:13:18 -0300;
  • 426fc24 Change some parameters to figure out bioconductor vignette error by Andre Nicolau <anicolau85@gmail.com> 2020-10-12 21:27:01 -0300;
  • 460c23e Change name field to new vignette format. by Andre Nicolau <anicolau85@gmail.com> 2020-10-12 21:20:57 -0300;
  • d7e88ae Parameter x by Andre Nicolau <anicolau85@gmail.com> 2020-06-02 15:53:52 -0300;
  • 85de302 (origin/RELEASE_3_11, RELEASE_3_11) Add function by Andre Nicolau <anicolau85@gmail.com> 2020-06-01 13:35:06 -0300;
  • b16db0b Merge remote-tracking branch 'upstream/master' by Andre Nicolau <anicolau85@gmail.com> 2020-06-01 12:25:01 -0300;
  • bf0fcdf Add comment by Andre Nicolau <anicolau85@gmail.com> 2020-06-01 12:22:20 -0300;
  • 0f75f60 Add documentation for newer functions by Andre Nicolau <anicolau85@gmail.com> 2020-05-22 16:15:23 -0300;
  • 2b41563 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:16:07 +0000;
  • 94a11d2 bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:16:07 +0000;
  • 066692e Insert feature to detect colnames in expression data starting number by Andre Nicolau <anicolau85@gmail.com> 2019-11-26 00:08:11 -0300;
  • dba434c Merge remote-tracking branch 'upstream/master' by Andre Nicolau <anicolau85@gmail.com> 2019-11-11 11:33:48 -0300;
  • 1ea1de5 Update some text presentation plots by Andre Nicolau <anicolau85@gmail.com> 2019-11-08 22:34:16 -0300;
  • 150e605 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:43:05 -0400;
  • 6228bd2 (origin/RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:11:08 -0400;
  • 4d31db6 Change threshold value for outliers samples suggestion by Andre Nicolau <anicolau85@gmail.com> 2019-06-19 19:42:49 -0300;
  • 74cea7c Change threshold value for outliers samples suggestion by Andre Nicolau <anicolau85@gmail.com> 2019-06-19 19:38:03 -0300;
  • bcc1b57 Add funcionality for suggest outliers samples by Andre Nicolau <anicolau85@gmail.com> 2019-06-19 19:17:51 -0300;
  • 714b869 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:15:47 -0400;
  • 68a1945 (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:54:11 -0400;
  • e491bd2 Add tab separator for write results by Andre Nicolau <anicolau85@gmail.com> 2019-01-21 17:06:01 -0200;
  • 11f846f (origin/RELEASE_3_8, RELEASE_3_8) Version bump by André Nicolau <anicolau85@gmail.com> 2019-01-14 15:06:52 -0200;
  • 1a53a0d Some alterations by André Nicolau <anicolau85@gmail.com> 2019-01-14 15:01:58 -0200;
  • 0d411e2 Change plot title font size for barplot by Andre Nicolau <anicolau85@gmail.com> 2019-01-10 15:32:54 -0200;
  • 81aec61 Change legend title font size for barplot by Andre Nicolau <anicolau85@gmail.com> 2019-01-10 15:13:55 -0200;
  • 2563df1 Change font size for boxplot by Andre Nicolau <anicolau85@gmail.com> 2019-01-10 15:10:57 -0200;
  • 8bf1154 Change font size for boxplot by Andre Nicolau <anicolau85@gmail.com> 2019-01-10 15:08:55 -0200;
  • f0ebf9a Change font size for barplot by Andre Nicolau <anicolau85@gmail.com> 2019-01-10 13:33:37 -0200;
  • af791a5 Change palette color by Andre Nicolau <anicolau85@gmail.com> 2019-01-09 19:23:58 -0200;
  • 863ebb6 Merge remote-tracking branch 'upstream/master' by André Nicolau <anicolau85@gmail.com> 2018-12-29 11:10:25 -0200;
  • 628dd6e Merge branch 'master' of https://github.com/csbl-usp/mdp by André Nicolau <anicolau85@gmail.com> 2018-12-29 11:05:35 -0200;
  • f96aa08 Removed duplicity color by André Nicolau <anicolau85@gmail.com> 2018-12-29 11:03:02 -0200;
  • 19d97d3 adding gridExtra in NAMESPACE by Thiago Hirata <thiagodch@headnode.cluster> 2018-12-19 16:23:36 -0200;
  • e535c91 Replaced multiplot with grid.arrange by Thiago D. C. Hirata <thiagodch@users.noreply.github.com> 2018-12-19 15:54:56 -0200;
  • de7bbf7 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:39 -0400;
  • f036a32 bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:42:09 -0400;
  • 7147eb1 bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:44 -0400;
  • c4b9926 (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:50 -0400;
  • c79db34 Update DESCRIPTION by melissalever <melissalever@gmail.com> 2018-04-15 08:36:29 +0100;
  • 8e6be0c include mdp.Rproj in .gitignore by melissalever <melissalever@gmail.com> 2018-04-13 20:56:17 -0300;
  • 13109d6 requested bioconductor changes by Melissa Lever <melissalever@gmail.com> 2018-04-13 20:49:43 -0300;
  • a1bbd87 Update DESCRIPTION by melissalever <melissalever@gmail.com> 2018-04-07 14:13:43 +0100;
  • 22b29d1 Update my-vignette.Rmd by melissalever <melissalever@gmail.com> 2018-04-04 18:17:52 -0300;
  • d58c4ac Update DESCRIPTION by melissalever <melissalever@gmail.com> 2018-04-04 18:15:50 -0300;
  • 4600490 Update DESCRIPTION by Computational Systems Biology Laboratory <hnakaya@usp.br> 2018-04-03 19:17:55 -0300;
  • 8199255 Update DESCRIPTION by Computational Systems Biology Laboratory <hnakaya@usp.br> 2018-04-03 19:03:26 -0300;
  • c225f68 Update DESCRIPTION by Computational Systems Biology Laboratory <hnakaya@usp.br> 2018-04-03 18:46:19 -0300;
  • ad9282f bioc check changes by Melissa Lever <melissalever@gmail.com> 2018-04-01 18:35:55 -0300;
  • b11cc86 r cmd checks by Melissa Lever <melissalever@gmail.com> 2018-03-30 12:11:24 -0300;
  • c24ee0d Update mdp.R by melissalever <melissalever@gmail.com> 2018-03-06 11:51:19 -0300;
  • aaac175 pathways by melissa <melissa.lever@gmail.com> 2018-02-27 15:00:21 -0300;
  • 4388f1a changes plot by melissa <melissa.lever@gmail.com> 2018-02-27 14:25:54 -0300;
  • d0e1c0e zscore change by melissa <melissa.lever@gmail.com> 2018-02-26 15:29:49 -0300;
  • fdb8483 mdp vingette added by melissa <melissa.lever@gmail.com> 2018-02-23 15:58:35 -0300;
  • 9753891 mdp vingette added by melissa <melissa.lever@gmail.com> 2018-02-23 15:57:42 -0300;
  • a5457c1 mdp rewrite by melissa <melissa.lever@gmail.com> 2018-02-22 19:37:18 -0300;
  • dc874ed perturbedchange by melissa <melissa.lever@gmail.com> 2018-01-30 19:47:10 -0200;
  • 6e086fe perturbedchange by melissa <melissa.lever@gmail.com> 2018-01-30 19:42:42 -0200;
  • 9368163 perturbed add by melissa <melissa.lever@gmail.com> 2017-12-06 12:29:17 -0200;
  • 83ef4a7 removed perturbed genes by melissa <melissa.lever@gmail.com> 2017-12-05 14:37:03 -0200;
  • 2cbdbfc change rowsums by melissa <melissa.lever@gmail.com> 2017-11-28 15:51:20 -0200;
  • 030570a minor by melissa <melissa.lever@gmail.com> 2017-11-21 20:18:09 -0200;
  • eb28c32 minor by melissa <melissa.lever@gmail.com> 2017-11-21 18:00:38 -0200;
  • 6901fad smdp plot corrections by melissa <melissa.lever@gmail.com> 2017-11-21 16:58:18 -0200;
  • aefe623 smdp plot corrections by melissa <melissa.lever@gmail.com> 2017-11-21 16:51:21 -0200;
  • 7724a64 pathway fig, smdp plot function by melissa <melissa.lever@gmail.com> 2017-11-19 17:20:08 -0200;
  • fc27582 Update mdp.R by melissalever <melissalever@gmail.com> 2017-11-13 21:01:01 -0200;
  • 7935a2c minor change by melissa <melissa.lever@gmail.com> 2017-11-10 19:12:58 -0200;
  • 0609226 minor changes by melissa <melissa.lever@gmail.com> 2017-11-10 18:41:50 -0200;
  • d636055 Update mdp.R by melissalever <melissalever@gmail.com> 2017-11-08 12:12:54 -0200;
  • c4f08d4 Update mdp.R by melissalever <melissalever@gmail.com> 2017-11-08 12:08:52 -0200;
  • e002a28 namespace and imports by melissa <melissa.lever@gmail.com> 2017-11-07 20:50:15 -0200;
  • 2567499 namespace and imports by melissa <melissa.lever@gmail.com> 2017-11-07 20:40:37 -0200;
  • 747815a warning checks for data by melissa <melissa.lever@gmail.com> 2017-11-01 17:39:09 -0200;
  • f37a513 doc updated by melissa <melissa.lever@gmail.com> 2017-11-01 14:34:06 -0200;
  • 3e1278e readme by melissa <melissa.lever@gmail.com> 2017-10-24 20:32:45 -0200;
  • 2732c68 First commit by melissa <melissa.lever@gmail.com> 2017-10-24 20:12:56 -0200;