man/pathway_summary.Rd
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 % Generated by roxygen2: do not edit by hand
 % Please edit documentation in R/mdp.R
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 \name{pathway_summary}
 \alias{pathway_summary}
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 \title{print pathways
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 generates a summary plot for pathways and sample score plot of best gene set}
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 \usage{
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 pathway_summary(sample_results, path, file_name, control_samples,
   control_lab)
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 }
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 \arguments{
 \item{sample_results}{list of sample scores for each geneset}
 
 \item{path}{directory to save images}
 
 \item{file_name}{name of saved imaged}
 
 \item{control_samples}{list of control sample names}
 
 \item{control_lab}{label that specifies control class}
 }
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 \value{
 data frame of signal to noise ratio of control vc test sample scores 
 for each pathway
 }
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 \description{
 print pathways
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 generates a summary plot for pathways and sample score plot of best gene set
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 }