Package: lmdme Type: Package Title: Linear Model decomposition for Designed Multivariate Experiments Version: 1.4.0 Date: 2013-04-29 Author: Cristobal Fresno and Elmer A. Fernandez Maintainer: Cristobal Fresno <cristobalfresno@gmail.com> Description: linear ANOVA decomposition of Multivariate Designed Experiments implementation based on limma lmFit. Features: i)Flexible formula type interface, ii) Fast limma based implementation, iii) p-values for each estimated coefficient levels in each factor, iv) F values for factor effects and v) plotting functions for PCA and PLS. License: GPL (>=2) biocViews: Microarray, OneChannel, TwoChannel, Bioinformatics, Visualization, AssayDomains, DifferentialExpression, ExperimentData, Cancer URL: http://www.bdmg.com.ar/?page_id=38 Imports: stats Depends: R (>= 2.14.1), methods, limma, pls, stemHypoxia Enhances: parallel Collate: 'lmdme-Class.R' 'lmdme-lmdme.R' 'lmdme-getters.R' 'lmdme-printshow.R' 'lmdme-padjust.R' 'lmdme-leverage.R' 'lmdme-permutation.R' 'lmdme-decomposition.R' 'lmdme-biplot.R' 'lmdme-screeplot.R' 'lmdme-loadingplot.R'