import(interactiveDisplayBase) import(AnnotationDbi) #import(AnnotationHub) #import(gridSVG) #importFrom(httr, content, GET) #importFrom(grid, grid.newpage, upViewport) #importFrom(GenomicRanges, seqnames, mcols,'seqlevels<-') import(methods) import(BiocGenerics) importFrom(ggplot2,ggplot,aes,geom_tile,coord_fixed,scale_fill_gradientn, scale_x_discrete,scale_y_discrete,coord_equal,theme_bw,theme, element_blank,element_text,xlab,ylab,ggtitle) #import(GenomicRanges) importFrom(gridSVG, grid.export) importFrom(reshape2,melt) import(shiny) #import(ggbio) import(Category) #import(GOstats) #import(shinyIncubator) importFrom(plyr,ldply) importFrom(grid, convertUnit) importFrom(RColorBrewer,brewer.pal) #import(GO.db) #importFrom(Gviz,ranges,IdeogramTrack,GenomeAxisTrack,AnnotationTrack,plotTracks) #importFrom(rtracklayer, ucscGenomes) importFrom(XML,saveXML) export(display) exportMethods(display) exportMethods(gridsvgjs) exportMethods(gridtweak) exportMethods(bicgo) exportMethods(simplenet) exportMethods(altgr)