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@@ -19,6 +19,11 @@
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#' require the UniProt Accession to make a proper connection to the IUPred2A
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#' REST API. If the UniProt Accession is not specified, the IUPred plot is
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#' skipped.
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+#'
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+#' Described in McFadden, W. M., & Yanowitz, J. L. (2022).
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+#' idpr: A package for profiling and analyzing Intrinsically Disordered
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+#' Proteins in R. PloS one,
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+#' \href{https://doi.org/10.1371/journal.pone.0266929}{17(4), e0266929}
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#' @param sequence amino acid sequence as a single character string or vector of
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#' single characters. It also supports a single character string that
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#' specifies the location of a .fasta or .fa file.
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@@ -218,7 +223,7 @@ idprofile <- function(
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orderPromoting = orderPromoting,
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proteinName = proteinName)
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foldIndexPlot <- foldIndexR(sequence = sequence,
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- foldIndexWindow = foldIndexWindowSize,
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+ window = foldIndexWindowSize,
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pH = foldIndex_pH,
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proteinName = proteinName,
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pKaSet = pKaSet)
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