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# idpr
Overall, ‘idpr’ aims to integrate tools for the computational analysis of
intrinsically disordered proteins within R. This package is used to identify
known characteristics of IDPs within a sequence of interest with easily
reported and dynamic results. Additionally, this package also includes tools
for IDP-based sequence analysis to be used in conjunction with other R
packages.
**Please Refer to idpr-vignette.Rmd file for a detailed introduction to the**
**idpr package.**
Links to the vignettes found at the
[Bioconductor landing page (here)](https://doi.org/doi:10.18129/B9.bioc.idpr)
## Installation
You can install the stable release version version from
[Bioconductor](https://doi.org/doi:10.18129/B9.bioc.idpr) with:
```r
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("idpr")
```
You can install the development version from
[Bioconductor](https://bioconductor.org/packages/devel/bioc/html/idpr.html)
with:
``` r
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
```
Or you can install the most recent development version from
[GitHub](https://github.com/wmm27/idpr) with:
``` r
# install.packages("devtools") #if not already installed
devtools::install_github("wmm27/idpr")
```
## Example
This is a basic example to quickly profile your protein of interest:
```{r example}
library(idpr)
P53_HUMAN <- TP53Sequences[2] #Getting a pre-loaded sequence from idpr
print(P53_HUMAN)
P53_ID <- "P04637" #Human TP53 UniProt ID
idprofile(sequence = P53_HUMAN, #Generates the Profile
uniprotAccession = P53_ID)
```
**Please Refer to idpr-vignette.Rmd file for a detailed introduction to the**
**idpr package.**
[Link to the Vignette (here)](https://bioconductor.org/packages/release/bioc/vignettes/idpr/inst/doc/idpr-vignette.html)
## Appendix
### Package citation
```{r}
citation("idpr")
```
### Additional Information
```{r}
Sys.time()
Sys.Date()
R.version
```
