Name Mode Size
.github 040000
R 040000
data 040000
man 040000
src 040000
tests 040000
vignettes 040000
.DS_Store 100644 8 kb
.Rbuildignore 100644 0 kb
.gitignore 100644 1 kb
DESCRIPTION 100644 2 kb
LICENSE 100644 34 kb
NAMESPACE 100644 1 kb
NEWS.md 100644 1 kb
README.md 100644 1 kb
_pkgdown.yml 100644 0 kb
codecov.yml 100644 0 kb
README.md
# hoodscanR: Cellular neighborhoods scanning from spatial transcriptomics data in R <img src="man/figures/hoodscanR_sticker.png" align="right" alt="" width="120" /> [![R-CMD-check](https://github.com/DavisLaboratory/hoodscanR/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/DavisLaboratory/hoodscanR/actions) [![Coverage status](https://codecov.io/gh/DavisLaboratory/hoodscanR/branch/devel/graph/badge.svg)](https://app.codecov.io/gh/DavisLaboratory/hoodscanR?branch=devel) Install released version from Bioconductor ``` if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("hoodscanR") ``` Install development version from GitHub ``` library(devtools) devtools::install_github("DavisLaboratory/hoodscanR") ```