% Generated by roxygen2: do not edit by hand % Please edit documentation in R/utils.R \name{get_path_names} \alias{get_path_names} \title{Tranlates path IDs to path names} \usage{ get_path_names(metaginfo, names, maxchar = NULL) } \arguments{ \item{metaginfo}{Pathways object} \item{names}{Character vector with the subpathway IDs to be translated} \item{maxchar}{Integer, describes the number of maximum characters to be shown. By default no filter is applied.} } \value{ A character vector including the readable names of the subpathways IDs, in the same order as provided. } \description{ Translates the subpathway IDs to readable and comprensible names. For effector subpathways, the names of the subpathways are encoded as "pathway: effector_protein", where "pathway" is the pathway to which the subpathway belongs and "effector_protein" is the name of the last node in the subpathway. For decomposed subpathways, the names of the subpathways are encoded as "pathway: receptor_protein - effector_protein", where "pathway" is the pathway to which the subpathway belongs, "receptor_protein" is the name of the initial node of the subpathway and "effector_protein" is the name of the last node in the subpathway. } \examples{ data(path_vals) pathways <- load_pathways(species = "hsa", pathways_list = c("hsa03320", "hsa04012")) translated_names <- get_path_names(pathways, rownames(path_vals)) }