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+% Generated by roxygen2: do not edit by hand

+% Please edit documentation in R/utils.R

+\name{get_path_names}

+\alias{get_path_names}

+\title{Tranlates path IDs to path names}

+\usage{

+get_path_names(metaginfo, names, maxchar = NULL)

+}

+\arguments{

+\item{metaginfo}{Pathways object}

+

+\item{names}{Character vector with the subpathway IDs to be translated}

+

+\item{maxchar}{Integer, describes the number of maximum characters to

+be shown. By default no filter is applied.}

+}

+\value{

+A character vector including the readable names of the

+subpathways IDs, in the same order as provided.

+}

+\description{

+Translates the subpathway IDs to readable and comprensible names.

+

+For effector subpathways, the names of the subpathways are encoded

+as "pathway: effector_protein", where "pathway" is the pathway to

+which the subpathway belongs and "effector_protein" is the name of

+the last node in the subpathway.

+

+For decomposed subpathways, the names of the subpathways are encoded

+as "pathway: receptor_protein - effector_protein", where "pathway" is

+the pathway to which the subpathway belongs, "receptor_protein" is the

+name of the initial node of the subpathway and "effector_protein" is

+the name of the last node in the subpathway.

+}

+\examples{

+data(path_vals)

+pathways <- load_pathways(species = "hsa", pathways_list = c("hsa03320",

+"hsa04012"))

+translated_names <- get_path_names(pathways, rownames(path_vals))

+

+}