1. gmapR
  2. doupdate.R
Browse code

update GSTRUCT source code

Michael Lawrence authored on 22/05/2019 19:39:45
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doupdate.R
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-source("~/gabe/checkedout/gmapR/scripts/getGmapGstructSourceCode.R")
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-fixMakefile()
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-updateGSTRUCTSrc()
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+source("scripts/getGmapGstructSourceCode.R")
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+enableMaintainerMode()
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+updateGSTRUCTSrc() # or updateGMAPSrc()
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+disableMaintainerMode()
Browse code

resurrect improvements that we reverted before the April release, expect breakage for a while

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/gmapR@110039 bc3139a8-67e5-0310-9ffc-ced21a209358

Michael Lawrence authored on 28/10/2015 18:51:00
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doupdate.R
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+source("~/gabe/checkedout/gmapR/scripts/getGmapGstructSourceCode.R")
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+fixMakefile()
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+updateGSTRUCTSrc()
Browse code

Reverted to r101133, along with NAMESPACE fixes

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/gmapR@102487 bc3139a8-67e5-0310-9ffc-ced21a209358

Michael Lawrence authored on 14/04/2015 21:40:44
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doupdate.R
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-source("~/gabe/checkedout/gmapR/scripts/getGmapGstructSourceCode.R")
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-fixMakefile()
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-updateGSTRUCTSrc()
Browse code

Recent work towards supporting the new features... will revert back to a stable version immediately...

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/gmapR@102485 bc3139a8-67e5-0310-9ffc-ced21a209358

Michael Lawrence authored on 14/04/2015 21:32:10
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doupdate.R
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new file mode 100755
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+source("~/gabe/checkedout/gmapR/scripts/getGmapGstructSourceCode.R")
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+fixMakefile()
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+updateGSTRUCTSrc()