December 3, 2015
Viewf053c5f

general cleanup and fixes, doc updates

Michael Lawrence authored on 03/12/2015 21:11:09
September 5, 2014
View9aca6bd

generalize TP53Genome to GeneGenome, which takes a character vector of gene names

Michael Lawrence authored on 05/09/2014 21:50:22
August 11, 2014
Viewc78be69

add codon tally support. No vbump yet

Gabriel Becker authored on 11/08/2014 23:42:48
May 13, 2014
View3b5cad5

add internal function for getting transcripts on the TP53 genome

Michael Lawrence authored on 13/05/2014 02:02:31
March 10, 2014
Viewfab13f0

TP53 genome is now named by the TxDb package from which the TP53 region was retrieved, so that it is automatically refreshed with annotation changes, and devel and release can coexist.

Michael Lawrence authored on 10/03/2014 23:10:51
July 15, 2013
Viewd7d925a

oops, the p53 test genome was on the wrong strand

Michael Lawrence authored on 15/07/2013 23:43:52
July 14, 2013
View0d754dd

add correct Seqinfo to the TP53Genome

Michael Lawrence authored on 14/07/2013 00:38:16
September 12, 2012
Viewabf2259

Refactor various TP53Genome-related convenience functions. Makes it easier to get out genomic annotations in the TP53 genome space.

Michael Lawrence authored on 12/09/2012 05:14:34
September 10, 2012
View9dfa7ad

added patches supplied by Greg

Cory Barr authored on 10/09/2012 22:52:34
September 7, 2012
Viewbad75f2

If TP53Genome has already been created, do not bother loading all of the packages, generating the splice sites, etc.

Michael Lawrence authored on 07/09/2012 17:16:41
Viewcc97426

TP53Genome now includes the known splice sites (from UCSC knownGene)

Michael Lawrence authored on 07/09/2012 16:50:33
September 6, 2012
View2256145

Add TP53Genome function

Michael Lawrence authored on 06/09/2012 23:14:14