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Vieweb2c4af
one more adjustment in response to the 'vals' -> 'filter' renaming in GenomicFeaturesHerve Pages authored on 05/04/2016 23:53:00 |
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Viewf053c5f
general cleanup and fixes, doc updatesMichael Lawrence authored on 03/12/2015 21:11:09 |
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Viewc78be69
add codon tally support. No vbump yetGabriel Becker authored on 11/08/2014 23:42:48 |
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Viewe72c091
attempt to fix unit tests for the Mac (OS X Mavericks)Michael Lawrence authored on 04/06/2014 23:33:32 |
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View0a2be6d
Use %over% instead of %in% (now defunct) between a GRangesList and a GRanges object.Herve Pages authored on 11/04/2013 16:40:41 |
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View5db28c4
Add getSeq,GmapGenome methodMichael Lawrence authored on 26/03/2013 21:44:17 |
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View1a08f35
force all tests to build 12mer indices to save memory (and thus hopefully build on the Hutch build machines)Michael Lawrence authored on 09/03/2013 01:04:14 |
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Viewcf7cde5
*added test to GmapGenome construct when directory is passed that doesn't existCory Barr authored on 22/11/2012 00:43:04 |
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View3190b2e
refer to txTP53 in unit test instead of undeclared txDan Tenenbaum authored on 28/09/2012 01:23:00 |
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View2ed0e62
added test for spliceSites<- methodCory Barr authored on 26/09/2012 21:22:34 |
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View15766c6
*drop passing of ... arg to method snps<- eventually dispatches onCory Barr authored on 12/09/2012 22:29:42 |
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Viewc6574d2
tests updated since if DNAStringSet obj is now used to create a GmapGenome, DNAStringSet obj needs names() setCory Barr authored on 12/09/2012 18:11:41 |
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Viewfa2ff4e
if GmapGenome constructor is called with a DNAStringSet, now requiring that object to have names set (gmap_build does not like empty names). Test addedCory Barr authored on 12/09/2012 00:06:17 |
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View0a4b811
exporting GmapSnps and GmapSnpDirectoryCory Barr authored on 21/08/2012 23:52:09 |
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Viewb22faf0
renaming gmapR2 to gmapR: it lives againMichael Lawrence authored on 02/08/2012 22:24:24 |