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View e12dab5
disable maintainer mode for gstruct; oopsMichael Lawrence authored on 28/10/2013 18:38:39 |
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View 4d5cc80
update to latest gstruct; brings faster bam_tally (for high coverage regions) and read-group filtering support in bam_tallyMichael Lawrence authored on 20/09/2013 02:05:42 |
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View a7d684d
punt; pass --disable-maintainer-mode to configureMichael Lawrence authored on 02/08/2013 18:38:59 |
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View 86afb16
Add R_Genome_getSeq for efficiently retrieving sequence from a GMAP genome index. This is super fast.Michael Lawrence authored on 26/03/2013 21:38:39 |
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View 29fb70f
*turned off parallelized make ("make -j"). It was causing issues with building on MacsCory Barr authored on 26/11/2012 19:45:58 |
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View 3f89995
Decoupling the bam tallying from summarization. Soon, we will return an IIT, which can be summarized in various ways. Currently, the only way is the variant summary.Michael Lawrence authored on 25/09/2012 16:00:17 |
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View 1099823
Pass LIBnn to gstruct and gmap via configure --libdir argument.Michael Lawrence authored on 07/08/2012 03:40:39 |
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View ca5cb9d
Use $(LIBnn) instead of 'lib' so that things work when 'lib' is supposed to be 'lib64'.Michael Lawrence authored on 05/08/2012 02:31:12 |
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View b22faf0
renaming gmapR2 to gmapR: it lives againMichael Lawrence authored on 02/08/2012 22:24:24 |