October 28, 2015
Viewa5e0518

various hacks to get the source code updater to work for me

Michael Lawrence authored on 28/10/2015 20:56:15
May 21, 2015
View7fce6e2

gstruct should always use trunk

Michael Lawrence authored on 21/05/2015 23:14:49
April 14, 2015
Viewd5ed124

Reverted to r101133, along with NAMESPACE fixes

Michael Lawrence authored on 14/04/2015 21:40:44
March 25, 2015
Viewf58d4e9

update gstruct/bamtally

Michael Lawrence authored on 25/03/2015 20:25:05
August 11, 2014
Viewc78be69

add codon tally support. No vbump yet

Gabriel Becker authored on 11/08/2014 23:42:48
May 13, 2014
Viewf5e63d3

update to new bam_tally with support for XS counting, which we now support via BamTallyParam@count_xs.

Michael Lawrence authored on 13/05/2014 02:04:05
April 2, 2014
View35ef817

update GMAP/GSNAP to 2013-10-1 branch; MAJOR optimizations.

Michael Lawrence authored on 02/04/2014 21:21:47
August 23, 2013
Viewaf9250b

some guidance for updating GMAP/GSTRUCT source code

Michael Lawrence authored on 23/08/2013 14:24:34
July 14, 2013
Viewb458ffe

fixes for GMAP/GSTRUCT source code updater

Michael Lawrence authored on 14/07/2013 00:37:35
March 26, 2013
View7024161

refactor GMAP/GSTRUCT code import to allow updating GMAP and GSTRUCT separately. Some other fixes.

Michael Lawrence authored on 26/03/2013 21:39:20
October 10, 2012
View36cb64f

added new version of gmap and gstruct src code

Cory Barr authored on 10/10/2012 00:38:59
October 4, 2012
Viewed79842

if replacing src files for GMAP, GSNAP, GSTRUCT, previous src directory is completely deleting prior to re-adding src

Cory Barr authored on 04/10/2012 00:12:03
October 3, 2012
Viewad42d27

updated script to add GMAP/GSNAP/GSTRUCT src from SVN repo

Cory Barr authored on 03/10/2012 23:02:14
August 17, 2012
View1e79ab4

moving script to update GMAP and gstruct source code to scripts dir

Cory Barr authored on 17/08/2012 23:09:24