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elementLengths was renamed -> elementNROWS in S4Vectors (new name reflects TRUE semantic, old name will be deprecated soon)Herve Pages authored on 29/01/2016 01:22:03 |
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renamed summarizeVariants to variantSummary the which in GsnapParam is now a GenomicRanges instead of a RangesList refactor the show method of BamTallyParam to rely on showAsCellMichael Lawrence authored on 15/07/2013 23:41:54 |
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*drop passing of ... arg to method snps<- eventually dispatches onCory Barr authored on 12/09/2012 22:29:42 |
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GmapSnpDirectory replace method now accepts name argCory Barr authored on 04/09/2012 22:50:45 |
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handled case when GmapSnp obj is created with path to VCF, but no genome specifiedCory Barr authored on 21/08/2012 23:49:18 |
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renaming gmapR2 to gmapR: it lives againMichael Lawrence authored on 02/08/2012 22:24:24 |