June 7, 2013
View569fefe

mark as unsupported on Mac per Michael

Dan Tenenbaum authored on 07/06/2013 17:00:26
April 3, 2013
View7a0706b

Creating branch for BioC 2.12 release.

Dan Tenenbaum authored on 03/04/2013 21:56:22
View61eb9cf

bump y of x.y.z version number for BioC 2.12 release

Dan Tenenbaum authored on 03/04/2013 21:32:27
Viewb19add7

Make sure that the genome index exists before attempting to retrieve sequence.

Michael Lawrence authored on 03/04/2013 18:46:36
April 2, 2013
View609d2fc

fix naming in GmapGenome->DNAStringSet coercion

Michael Lawrence authored on 02/04/2013 22:42:00
Viewd6a3779

check in the NEWS file

Michael Lawrence authored on 02/04/2013 22:39:12
March 30, 2013
Viewc83be0b

Change maintainer; version bump

Michael Lawrence authored on 30/03/2013 02:38:51
View82c0838

import 'exons'

Michael Lawrence authored on 30/03/2013 02:36:06
March 27, 2013
Viewa2a29ed

Add <stdlib.h> include to solve undefined off_t issue.

Michael Lawrence authored on 27/03/2013 19:58:06
View2f697ca

Add GmapGenome->DNAStringSet coercion, exports the whole genome sequence. This means export(x, "genome.fasta") should work.

Michael Lawrence authored on 27/03/2013 19:11:09
View8edb187

Make seqinfo(x) the default for 'which' in getSeq,GmapGenome

Michael Lawrence authored on 27/03/2013 18:47:53
March 26, 2013
View248ed95

Export new stuff, bump version

Michael Lawrence authored on 26/03/2013 21:44:37
View5db28c4

Add getSeq,GmapGenome method

Michael Lawrence authored on 26/03/2013 21:44:17
Viewdf903e0

Add ignore_duplicate argument to BamTallyParam

Michael Lawrence authored on 26/03/2013 21:40:15
View7024161

refactor GMAP/GSTRUCT code import to allow updating GMAP and GSTRUCT separately. Some other fixes.

Michael Lawrence authored on 26/03/2013 21:39:20