November 13, 2015
View 685d60e

work towards supporting new bam_tally; drops quality info (now cutoff based), adds xs/nm/del and codon-level counts

Michael Lawrence authored on 13/11/2015 21:50:11
November 2, 2015
View f18ff85

more robust check for empty read pos breaks

Michael Lawrence authored on 02/11/2015 22:42:05
View bfeb9ea

fix forwarding args to TallyIIT

Michael Lawrence authored on 02/11/2015 21:40:00
October 28, 2015
View a5e0518

various hacks to get the source code updater to work for me

Michael Lawrence authored on 28/10/2015 20:56:15
View f51bc89

Update gstruct (bam_tally)

Michael Lawrence authored on 28/10/2015 20:55:30
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Makefile cleanup

Michael Lawrence authored on 28/10/2015 20:53:26
View 8418591

resurrect improvements that we reverted before the April release, expect breakage for a while

Michael Lawrence authored on 28/10/2015 18:51:00
October 13, 2015
View 1f42582

Bumped version number of all packages after creation of 3.2 branch.

Dan Tenenbaum authored on 13/10/2015 19:59:53
View e4a80ba

Bumped versions of all packages prior to creating 3.2 branch.

Dan Tenenbaum authored on 13/10/2015 19:36:05
August 7, 2015
View 093e455

labeledLine() was moved from BiocGenerics to S4Vectors

Herve Pages authored on 07/08/2015 23:37:20
May 21, 2015
View 7fce6e2

gstruct should always use trunk

Michael Lawrence authored on 21/05/2015 23:14:49
April 16, 2015
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Bump versions in trunk after creation of 3.1 branch.

Dan Tenenbaum authored on 16/04/2015 20:02:44
View f777bf1

Bump versions prior to creating 3.1 branch.

Dan Tenenbaum authored on 16/04/2015 19:42:01
April 14, 2015
View d5ed124

Reverted to r101133, along with NAMESPACE fixes

Michael Lawrence authored on 14/04/2015 21:40:44
View c8fd96e

Recent work towards supporting the new features... will revert back to a stable version immediately...

Michael Lawrence authored on 14/04/2015 21:32:10