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View 5659f09
add raw total count statistic to tallies (everything else now qual filtered)Michael Lawrence authored on 24/11/2015 22:19:59 |
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View ead94b3
add ability to call GMAPMichael Lawrence authored on 23/11/2015 23:25:34 |
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View b8e2b22
let users pass a 'param' when building a GmapGenome from a FaFileMichael Lawrence authored on 20/11/2015 12:24:09 |
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View 2332d26
add untested support for FaFile=>GmapGenomeMichael Lawrence authored on 19/11/2015 18:51:30 |
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View 38518dd
fixes for bam_tally updateMichael Lawrence authored on 13/11/2015 22:40:27 |
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View 685d60e
work towards supporting new bam_tally; drops quality info (now cutoff based), adds xs/nm/del and codon-level countsMichael Lawrence authored on 13/11/2015 21:50:11 |
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View f18ff85
more robust check for empty read pos breaksMichael Lawrence authored on 02/11/2015 22:42:05 |
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View bfeb9ea
fix forwarding args to TallyIITMichael Lawrence authored on 02/11/2015 21:40:00 |
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View a5e0518
various hacks to get the source code updater to work for meMichael Lawrence authored on 28/10/2015 20:56:15 |
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View f51bc89
Update gstruct (bam_tally)Michael Lawrence authored on 28/10/2015 20:55:30 |
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View a49cb8d
Makefile cleanupMichael Lawrence authored on 28/10/2015 20:53:26 |
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View 8418591
resurrect improvements that we reverted before the April release, expect breakage for a whileMichael Lawrence authored on 28/10/2015 18:51:00 |
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View 1f42582
Bumped version number of all packages after creation of 3.2 branch.Dan Tenenbaum authored on 13/10/2015 19:59:53 |
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View e4a80ba
Bumped versions of all packages prior to creating 3.2 branch.Dan Tenenbaum authored on 13/10/2015 19:36:05 |
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View 093e455
labeledLine() was moved from BiocGenerics to S4VectorsHerve Pages authored on 07/08/2015 23:37:20 |