November 14, 2016
View55d77a1

update to latest GSTRUCT

Michael Lawrence authored on 14/11/2016 21:54:30
December 5, 2015
View4a648a5

regenerate autotools stuff

Michael Lawrence authored on 05/12/2015 14:42:50
October 28, 2015
View8418591

resurrect improvements that we reverted before the April release, expect breakage for a while

Michael Lawrence authored on 28/10/2015 18:51:00
April 14, 2015
Viewd5ed124

Reverted to r101133, along with NAMESPACE fixes

Michael Lawrence authored on 14/04/2015 21:40:44
Viewc8fd96e

Recent work towards supporting the new features... will revert back to a stable version immediately...

Michael Lawrence authored on 14/04/2015 21:32:10
March 25, 2015
Viewf58d4e9

update gstruct/bamtally

Michael Lawrence authored on 25/03/2015 20:25:05
August 14, 2014
Viewcfb01d1

some fiddling, disable maintainer mode, vbump

Gabriel Becker authored on 14/08/2014 20:39:03
August 11, 2014
Viewc78be69

add codon tally support. No vbump yet

Gabriel Becker authored on 11/08/2014 23:42:48
July 3, 2014
Viewd71517d

once again, disable maintainer mode for gstruct

Michael Lawrence authored on 03/07/2014 23:40:24
June 6, 2014
View52b3ca6

update gstruct (hopefully fix build)

Michael Lawrence authored on 06/06/2014 22:10:15
May 13, 2014
Viewf5e63d3

update to new bam_tally with support for XS counting, which we now support via BamTallyParam@count_xs.

Michael Lawrence authored on 13/05/2014 02:04:05
May 5, 2014
View9f0e3a7

bam_tally has reworked memory management to avoid memory "leaks" that seem to happen on our cluster

Michael Lawrence authored on 05/05/2014 21:02:45
April 30, 2014
View144f6bb

update bam_tally, mostly to fix memory leaks but we are also moving towards a decent indel realigner

Michael Lawrence authored on 30/04/2014 17:04:17
April 2, 2014
View1beff33

fix disable-maintainer-mode

Michael Lawrence authored on 02/04/2014 22:35:46
View17db5e7

update GSTRUCT (bam_tally); add include_soft_clip parameter for counting over soft clips of a given max length (more accurate allele frequency)

Michael Lawrence authored on 02/04/2014 22:03:40