November 14, 2016
View55d77a1

update to latest GSTRUCT

Michael Lawrence authored on 14/11/2016 21:54:30
October 28, 2015
Viewf51bc89

Update gstruct (bam_tally)

Michael Lawrence authored on 28/10/2015 20:55:30
View8418591

resurrect improvements that we reverted before the April release, expect breakage for a while

Michael Lawrence authored on 28/10/2015 18:51:00
April 14, 2015
Viewd5ed124

Reverted to r101133, along with NAMESPACE fixes

Michael Lawrence authored on 14/04/2015 21:40:44
March 25, 2015
Viewf58d4e9

update gstruct/bamtally

Michael Lawrence authored on 25/03/2015 20:25:05
August 11, 2014
Viewc78be69

add codon tally support. No vbump yet

Gabriel Becker authored on 11/08/2014 23:42:48
April 2, 2014
View17db5e7

update GSTRUCT (bam_tally); add include_soft_clip parameter for counting over soft clips of a given max length (more accurate allele frequency)

Michael Lawrence authored on 02/04/2014 22:03:40
January 14, 2014
View3a231c3

update bam_tally to fix counting issue with some range-restricted queries

Michael Lawrence authored on 14/01/2014 19:15:57
March 26, 2013
View95e6ece

Update gstruct; bam_tally now supports ignoring PCR/optical duplicates.

Michael Lawrence authored on 26/03/2013 21:37:34
October 10, 2012
View36cb64f

added new version of gmap and gstruct src code

Cory Barr authored on 10/10/2012 00:38:59
View5fa057e

removing old gstruct and gmap src code before adding new src

Cory Barr authored on 10/10/2012 00:34:30
August 2, 2012
Viewb22faf0

renaming gmapR2 to gmapR: it lives again

Michael Lawrence authored on 02/08/2012 22:24:24