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View 8418591
resurrect improvements that we reverted before the April release, expect breakage for a whileMichael Lawrence authored on 28/10/2015 18:51:00 |
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View 093e455
labeledLine() was moved from BiocGenerics to S4VectorsHerve Pages authored on 07/08/2015 23:37:20 |
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View d5ed124
Reverted to r101133, along with NAMESPACE fixesMichael Lawrence authored on 14/04/2015 21:40:44 |
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View c8fd96e
Recent work towards supporting the new features... will revert back to a stable version immediately...Michael Lawrence authored on 14/04/2015 21:32:10 |
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View e26b36b
no need to declare POSIXlt classMichael Lawrence authored on 12/04/2015 04:17:43 |
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View 53f6387
getSeq,GmapGenome now checks that seqinfo(x) and seqinfo(which) are compatibleMichael Lawrence authored on 12/02/2015 21:44:32 |
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View 60982df
some internal cleanup in BamTallyParamMichael Lawrence authored on 13/10/2014 18:07:30 |
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View 277f5cf
GsnapOutputList now uses the internal list constructor from S4Vectors (instead of IRanges)Michael Lawrence authored on 11/10/2014 20:33:08 |
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View 555225f
allow genomes to be built from any sequence file supported by rtracklayerMichael Lawrence authored on 11/10/2014 18:17:31 |
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View 9aca6bd
generalize TP53Genome to GeneGenome, which takes a character vector of gene namesMichael Lawrence authored on 05/09/2014 21:50:22 |
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View cfb01d1
some fiddling, disable maintainer mode, vbumpGabriel Becker authored on 14/08/2014 20:39:03 |
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View 085e7d8
fix change of cds_iit to exon_iitGabriel Becker authored on 13/08/2014 20:26:10 |
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View c78be69
add codon tally support. No vbump yetGabriel Becker authored on 11/08/2014 23:42:48 |
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View c0cce6c
follow renaming of TranscriptDb class -> TxDbHerve Pages authored on 28/07/2014 23:15:59 |
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View 6f40570
fix typo in VCF FORMAT header for read.pos.mean.refMichael Lawrence authored on 25/07/2014 20:15:30 |