git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/gmapR@68550 bc3139a8-67e5-0310-9ffc-ced21a209358
Michael Lawrence authored on 17/08/2012 20:18:15
| ... | ... |
@@ -152,7 +152,7 @@ GsnapParam <- function(genome, unique_only = FALSE, |
| 152 | 152 |
npaths = if (unique_only) 1L else 100L, |
| 153 | 153 |
quiet_if_excessive = unique_only, nofails = unique_only, |
| 154 | 154 |
split_output = !unique_only, |
| 155 |
- novelsplicing = 0L, splicing = NULL, |
|
| 155 |
+ novelsplicing = FALSE, splicing = NULL, |
|
| 156 | 156 |
nthreads = 1L, part = NULL, batch = "2", ...) {
|
| 157 | 157 |
params <- formals(sys.function()) |
| 158 | 158 |
mc <- as.list(match.call(expand.dots = FALSE))[-1L] |