1. gmapR
  2. Commit a62c0bcbdcb1152020670b5e628bc702decbed15
Browse code

synchronize Makefile.in files

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/gmapR@79211 bc3139a8-67e5-0310-9ffc-ced21a209358

Michael Lawrence authored on 02/08/2013 20:04:01
Showing 6 changed files
src/gmap/Makefile.in
History View file @ a62c0bc
... ... 
@@ -229,6 +229,7 @@ LIBTOOL = @LIBTOOL@
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 LIPO = @LIPO@
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 LN_S = @LN_S@
231 231 
 LTLIBOBJS = @LTLIBOBJS@
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+MAINT = @MAINT@
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 MAKEINFO = @MAKEINFO@
233 234 
 MANIFEST_TOOL = @MANIFEST_TOOL@
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 MAX_READLENGTH = @MAX_READLENGTH@
... ... 
@@ -325,7 +326,7 @@ all: all-recursive
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 .SUFFIXES:
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 am--refresh: Makefile
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 	@:
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-$(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
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+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am  $(am__configure_deps)
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 	@for dep in $?; do \
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 	  case '$(am__configure_deps)' in \
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 	    *$$dep*) \
... ... 
@@ -352,9 +353,9 @@ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
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 $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
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 	$(SHELL) ./config.status --recheck
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-$(top_srcdir)/configure:  $(am__configure_deps)
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+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
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 	$(am__cd) $(srcdir) && $(AUTOCONF)
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-$(ACLOCAL_M4):  $(am__aclocal_m4_deps)
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+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
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 	$(am__cd) $(srcdir) && $(ACLOCAL) $(ACLOCAL_AMFLAGS)
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 $(am__aclocal_m4_deps):
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src/gmap/src/Makefile.in
History View file @ a62c0bc
... ... 
@@ -460,6 +460,7 @@ LIBTOOL = @LIBTOOL@
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 LIPO = @LIPO@
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 LN_S = @LN_S@
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 LTLIBOBJS = @LTLIBOBJS@
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+MAINT = @MAINT@
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 MAKEINFO = @MAKEINFO@
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 MANIFEST_TOOL = @MANIFEST_TOOL@
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 MAX_READLENGTH = @MAX_READLENGTH@
... ... 
@@ -784,7 +785,7 @@ all: config.h
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 .SUFFIXES:
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 .SUFFIXES: .c .lo .o .obj
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-$(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
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+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am  $(am__configure_deps)
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 	@for dep in $?; do \
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 	  case '$(am__configure_deps)' in \
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 	    *$$dep*) \
... ... 
@@ -809,9 +810,9 @@ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
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 $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
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 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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-$(top_srcdir)/configure:  $(am__configure_deps)
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+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
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 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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-$(ACLOCAL_M4):  $(am__aclocal_m4_deps)
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+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
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 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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 $(am__aclocal_m4_deps):
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... ... 
@@ -822,7 +823,7 @@ config.h: stamp-h1
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 stamp-h1: $(srcdir)/config.h.in $(top_builddir)/config.status
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 	@rm -f stamp-h1
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 	cd $(top_builddir) && $(SHELL) ./config.status src/config.h
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-$(srcdir)/config.h.in:  $(am__configure_deps)
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+$(srcdir)/config.h.in: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
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 	($(am__cd) $(top_srcdir) && $(AUTOHEADER))
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 	rm -f stamp-h1
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 	touch $@
src/gmap/tests/Makefile.in
History View file @ a62c0bc
... ... 
@@ -346,6 +346,7 @@ LIBTOOL = @LIBTOOL@
346 346 
 LIPO = @LIPO@
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 LN_S = @LN_S@
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 LTLIBOBJS = @LTLIBOBJS@
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+MAINT = @MAINT@
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 MAKEINFO = @MAKEINFO@
350 351 
 MANIFEST_TOOL = @MANIFEST_TOOL@
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 MAX_READLENGTH = @MAX_READLENGTH@
... ... 
@@ -455,7 +456,7 @@ all: all-am
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 .SUFFIXES:
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 .SUFFIXES: .log .test .test$(EXEEXT) .trs
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-$(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
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+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am  $(am__configure_deps)
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 	@for dep in $?; do \
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 	  case '$(am__configure_deps)' in \
461 462 
 	    *$$dep*) \
... ... 
@@ -480,9 +481,9 @@ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
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 $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
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 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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-$(top_srcdir)/configure:  $(am__configure_deps)
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+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
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 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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-$(ACLOCAL_M4):  $(am__aclocal_m4_deps)
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+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
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 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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 $(am__aclocal_m4_deps):
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 align.test: $(top_builddir)/config.status $(srcdir)/align.test.in
src/gmap/util/Makefile.in
History View file @ a62c0bc
... ... 
@@ -186,6 +186,7 @@ LIBTOOL = @LIBTOOL@
186 186 
 LIPO = @LIPO@
187 187 
 LN_S = @LN_S@
188 188 
 LTLIBOBJS = @LTLIBOBJS@
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+MAINT = @MAINT@
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 MAKEINFO = @MAKEINFO@
190 191 
 MANIFEST_TOOL = @MANIFEST_TOOL@
191 192 
 MAX_READLENGTH = @MAX_READLENGTH@
... ... 
@@ -300,7 +301,7 @@ top_srcdir = @top_srcdir@
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 all: all-am
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 .SUFFIXES:
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-$(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
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+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am  $(am__configure_deps)
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 	@for dep in $?; do \
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 	  case '$(am__configure_deps)' in \
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 	    *$$dep*) \
... ... 
@@ -325,9 +326,9 @@ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
325 326 
 $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
326 327 
 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
327 328
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-$(top_srcdir)/configure:  $(am__configure_deps)
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+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
329 330 
 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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-$(ACLOCAL_M4):  $(am__aclocal_m4_deps)
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+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
331 332 
 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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 $(am__aclocal_m4_deps):
333 334 
 gmap_compress.pl: $(top_builddir)/config.status $(srcdir)/gmap_compress.pl.in
src/gstruct/Makefile.in
History View file @ a62c0bc
... ... 
@@ -231,6 +231,7 @@ LIBTOOL = @LIBTOOL@
231 231 
 LIPO = @LIPO@
232 232 
 LN_S = @LN_S@
233 233 
 LTLIBOBJS = @LTLIBOBJS@
234 
+MAINT = @MAINT@
234 235 
 MAKEINFO = @MAKEINFO@
235 236 
 MANIFEST_TOOL = @MANIFEST_TOOL@
236 237 
 MKDIR_P = @MKDIR_P@
... ... 
@@ -328,7 +329,7 @@ all: all-recursive
328 329 
 .SUFFIXES:
329 330 
 am--refresh: Makefile
330 331 
 	@:
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-$(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
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+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am  $(am__configure_deps)
332 333 
 	@for dep in $?; do \
333 334 
 	  case '$(am__configure_deps)' in \
334 335 
 	    *$$dep*) \
... ... 
@@ -355,9 +356,9 @@ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
355 356 
 $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
356 357 
 	$(SHELL) ./config.status --recheck
357 358
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-$(top_srcdir)/configure:  $(am__configure_deps)
359 
+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
359 360 
 	$(am__cd) $(srcdir) && $(AUTOCONF)
360 
-$(ACLOCAL_M4):  $(am__aclocal_m4_deps)
361 
+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
361 362 
 	$(am__cd) $(srcdir) && $(ACLOCAL) $(ACLOCAL_AMFLAGS)
362 363 
 $(am__aclocal_m4_deps):
363 364 
 lib/gstruct-${LIBGSTRUCT_API_VERSION}.pc: $(top_builddir)/config.status $(top_srcdir)/lib/gstruct.pc.in
src/gstruct/src/Makefile.in
History View file @ a62c0bc
... ... 
@@ -360,6 +360,7 @@ LIBTOOL = @LIBTOOL@
360 360 
 LIPO = @LIPO@
361 361 
 LN_S = @LN_S@
362 362 
 LTLIBOBJS = @LTLIBOBJS@
363 
+MAINT = @MAINT@
363 364 
 MAKEINFO = @MAKEINFO@
364 365 
 MANIFEST_TOOL = @MANIFEST_TOOL@
365 366 
 MKDIR_P = @MKDIR_P@
... ... 
@@ -704,7 +705,7 @@ all: config.h
704 705
705 706 
 .SUFFIXES:
706 707 
 .SUFFIXES: .c .lo .o .obj
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-$(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
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+$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am  $(am__configure_deps)
708 709 
 	@for dep in $?; do \
709 710 
 	  case '$(am__configure_deps)' in \
710 711 
 	    *$$dep*) \
... ... 
@@ -729,9 +730,9 @@ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
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 $(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
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 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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-$(top_srcdir)/configure:  $(am__configure_deps)
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+$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
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 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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-$(ACLOCAL_M4):  $(am__aclocal_m4_deps)
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+$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
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 	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
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 $(am__aclocal_m4_deps):
737 738
... ... 
@@ -742,7 +743,7 @@ config.h: stamp-h1
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 stamp-h1: $(srcdir)/config.h.in $(top_builddir)/config.status
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 	@rm -f stamp-h1
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 	cd $(top_builddir) && $(SHELL) ./config.status src/config.h
745 
-$(srcdir)/config.h.in:  $(am__configure_deps)
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+$(srcdir)/config.h.in: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
746 747 
 	($(am__cd) $(top_srcdir) && $(AUTOHEADER))
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 	rm -f stamp-h1
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 	touch $@