git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/gmapR@95338 bc3139a8-67e5-0310-9ffc-ced21a209358
... | ... |
@@ -22,7 +22,7 @@ |
22 | 22 |
min_depth = 0L, variant_strand = 0L, |
23 | 23 |
ignore_query_Ns = FALSE, |
24 | 24 |
indels = FALSE, include_soft_clips = 0L, |
25 |
- cds_iit = NULL, IIT_BPPARAM = NULL) |
|
25 |
+ exon_iit = NULL, IIT_BPPARAM = NULL) |
|
26 | 26 |
} |
27 | 27 |
\arguments{ |
28 | 28 |
\item{genome}{A \code{GmapGenome} object, or something coercible to one.} |