Browse code

config.h should not be in VC, just config.h.in

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/gmapR@79758 bc3139a8-67e5-0310-9ffc-ced21a209358

Michael Lawrence authored on 23/08/2013 14:10:17
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-/* src/config.h.  Generated from config.h.in by configure.  */
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-/* src/config.h.in.  Generated from configure.ac by autoheader.  */
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-
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-/* Define if building universal (internal helper macro) */
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-/* #undef AC_APPLE_UNIVERSAL_BUILD */
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-
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-/* Define to 1 if the system has the type `caddr_t'. */
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-#define HAVE_CADDR_T 1
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-
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-/* Define to 1 if you have the `ceil' function. */
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-#define HAVE_CEIL 1
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-
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-/* Define to 1 if you have the <dirent.h> header file, and it defines `DIR'.
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-   */
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-#define HAVE_DIRENT_H 1
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-
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-/* Define to 1 if you have the <dlfcn.h> header file. */
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-#define HAVE_DLFCN_H 1
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-
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-/* Define to 1 if you have the <fcntl.h> header file. */
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-#define HAVE_FCNTL_H 1
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-
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-/* Define to 1 if you have the `floor' function. */
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-#define HAVE_FLOOR 1
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-
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-/* Define to 1 if fseeko (and presumably ftello) exists and is declared. */
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-#define HAVE_FSEEKO 1
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-
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-/* Define to 1 if you have the `index' function. */
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-#define HAVE_INDEX 1
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-
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-/* Define to 1 if you have the <inttypes.h> header file. */
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-#define HAVE_INTTYPES_H 1
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-
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-/* Define to 1 if you have the `m' library (-lm). */
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-#define HAVE_LIBM 1
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-
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-/* Define to 1 if you have the <limits.h> header file. */
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-#define HAVE_LIMITS_H 1
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-
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-/* Define to 1 if you have the `log' function. */
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-#define HAVE_LOG 1
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-
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-/* Define to 1 if you have the `madvise' function. */
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-#define HAVE_MADVISE 1
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-
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-/* Define to 1 if MADV_DONTNEED available for madvise. */
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-#define HAVE_MADVISE_MADV_DONTNEED 1
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-
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-/* Define to 1 if MADV_RANDOM available for madvise */
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-#define HAVE_MADVISE_MADV_RANDOM 1
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-
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-/* Define to 1 if MADV_WILLNEED available for madvise. */
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-#define HAVE_MADVISE_MADV_WILLNEED 1
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-
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-/* Define to 1 if you have the `memcpy' function. */
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-#define HAVE_MEMCPY 1
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-
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-/* Define to 1 if you have the `memmove' function. */
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-#define HAVE_MEMMOVE 1
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-
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-/* Define to 1 if you have the <memory.h> header file. */
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-#define HAVE_MEMORY_H 1
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-
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-/* Define to 1 if you have the `memset' function. */
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-#define HAVE_MEMSET 1
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-
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-/* Define to 1 if you have a working 'mmap' system call. */
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-#define HAVE_MMAP 1
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-
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-/* Define to 1 if MAP_FILE available for mmap. */
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-#define HAVE_MMAP_MAP_FILE 1
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-
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-/* Define to 1 if MAP_PRIVATE available for mmap */
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-#define HAVE_MMAP_MAP_PRIVATE 1
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-
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-/* Define to 1 if MAP_SHARED available for mmap */
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-#define HAVE_MMAP_MAP_SHARED 1
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-
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-/* Define to 1 if MAP_VARIABLE available for mmap. */
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-/* #undef HAVE_MMAP_MAP_VARIABLE */
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-
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-/* Define to 1 if you have the `munmap' function. */
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-#define HAVE_MUNMAP 1
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-
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-/* Define to 1 if you have the <ndir.h> header file, and it defines `DIR'. */
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-/* #undef HAVE_NDIR_H */
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-
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-/* Define to 1 if you have the `pow' function. */
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-#define HAVE_POW 1
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-
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-/* Define to 1 if you have the `rint' function. */
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-#define HAVE_RINT 1
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-
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-/* Define to 1 if you have a working Samtools library. */
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-/* #undef HAVE_SAMTOOLS */
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-
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-/* Define to 1 if you have the `sigaction' function. */
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-#define HAVE_SIGACTION 1
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-
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-/* Define to 1 if you have the `stat64' function. */
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-#define HAVE_STAT64 1
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-
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-/* Define to 1 if you have the <stddef.h> header file. */
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-#define HAVE_STDDEF_H 1
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-
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-/* Define to 1 if you have the <stdint.h> header file. */
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-#define HAVE_STDINT_H 1
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-
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-/* Define to 1 if you have the <stdlib.h> header file. */
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-#define HAVE_STDLIB_H 1
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-
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-/* Define to 1 if you have the <strings.h> header file. */
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-#define HAVE_STRINGS_H 1
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-
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-/* Define to 1 if you have the <string.h> header file. */
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-#define HAVE_STRING_H 1
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-
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-/* Define to 1 if you have the `strtoul' function. */
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-#define HAVE_STRTOUL 1
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-
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-/* have struct stat64 */
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-/* #undef HAVE_STRUCT_STAT64 */
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-
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-/* Define to 1 if you have the `sysconf' function. */
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-#define HAVE_SYSCONF 1
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-
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-/* Define to 1 if you have the `sysctl' function. */
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-#define HAVE_SYSCTL 1
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-
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-/* Define to 1 if you have the <sys/dir.h> header file, and it defines `DIR'.
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-   */
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-/* #undef HAVE_SYS_DIR_H */
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-
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-/* Define to 1 if you have the <sys/ndir.h> header file, and it defines `DIR'.
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-   */
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-/* #undef HAVE_SYS_NDIR_H */
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-
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-/* Define to 1 if you have the <sys/stat.h> header file. */
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-#define HAVE_SYS_STAT_H 1
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-
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-/* Define to 1 if you have the <sys/types.h> header file. */
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-#define HAVE_SYS_TYPES_H 1
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-
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-/* Define to 1 if you have the <unistd.h> header file. */
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-#define HAVE_UNISTD_H 1
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-
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-/* Define to 1 if you have a working zlib library. */
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-#define HAVE_ZLIB 1
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-
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-/* Define to 1 if your zlib library has a gzbuffer function. */
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-#define HAVE_ZLIB_GZBUFFER 1
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-
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-/* Define to the sub-directory in which libtool stores uninstalled libraries.
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-   */
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-#define LT_OBJDIR ".libs/"
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-
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-/* Define MAP_FAILED here if not available otherwise. */
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-/* #undef MAP_FAILED */
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-
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-/* Define to 1 if your C compiler doesn't accept -c and -o together. */
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-/* #undef NO_MINUS_C_MINUS_O */
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-
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-/* Name of package */
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-#define PACKAGE "gstruct"
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-
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-/* Define to the address where bug reports for this package should be sent. */
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-#define PACKAGE_BUGREPORT "Thomas Wu <twu@gene.com>"
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-
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-/* Define to the full name of this package. */
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-#define PACKAGE_NAME "gstruct"
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-
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-/* Define to the full name and version of this package. */
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-#define PACKAGE_STRING "gstruct 2013-02-14"
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-
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-/* Define to the one symbol short name of this package. */
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-#define PACKAGE_TARNAME "gstruct"
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-
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-/* Define to the home page for this package. */
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-#define PACKAGE_URL ""
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-
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-/* Define to the version of this package. */
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-#define PACKAGE_VERSION "2013-02-14"
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-
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-/* pagesize is available via sysconf */
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-#define PAGESIZE_VIA_SYSCONF 1
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-
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-/* pagesize is available via sysctl */
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-/* #undef PAGESIZE_VIA_SYSCTL */
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-
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-/* The size of `unsigned long', as computed by sizeof. */
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-#define SIZEOF_UNSIGNED_LONG 8
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-
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-/* The size of `unsigned long long', as computed by sizeof. */
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-#define SIZEOF_UNSIGNED_LONG_LONG 8
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-
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-/* Define to 1 if you have the ANSI C header files. */
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-#define STDC_HEADERS 1
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-
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-/* Define this if we can use the "b" mode for fopen safely. */
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-#define USE_FOPEN_BINARY 1
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-
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-/* Define this if we can use the "t" mode for fopen safely. */
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-#define USE_FOPEN_TEXT 1
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-
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-/* Version number of package */
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-#define VERSION "2013-02-14"
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-
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-/* Define WORDS_BIGENDIAN to 1 if your processor stores words with the most
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-   significant byte first (like Motorola and SPARC, unlike Intel). */
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-#if defined AC_APPLE_UNIVERSAL_BUILD
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-# if defined __BIG_ENDIAN__
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-#  define WORDS_BIGENDIAN 1
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-# endif
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-#else
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-# ifndef WORDS_BIGENDIAN
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-/* #  undef WORDS_BIGENDIAN */
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-# endif
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-#endif
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-
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-/* Enable large inode numbers on Mac OS X 10.5.  */
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-#ifndef _DARWIN_USE_64_BIT_INODE
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-# define _DARWIN_USE_64_BIT_INODE 1
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-#endif
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-
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-/* Number of bits in a file offset, on hosts where this is settable. */
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-/* #undef _FILE_OFFSET_BITS */
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-
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-/* Define to 1 to make fseeko visible on some hosts (e.g. glibc 2.2). */
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-/* #undef _LARGEFILE_SOURCE */
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-
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-/* Define for large files, on AIX-style hosts. */
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-/* #undef _LARGE_FILES */
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-
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-/* Define to empty if `const' does not conform to ANSI C. */
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-/* #undef const */
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-
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-/* Define to `long int' if <sys/types.h> does not define. */
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-/* #undef off_t */
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-
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-/* Define to `unsigned int' if <sys/types.h> does not define. */
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-/* #undef size_t */
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-
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-/* Define to empty if the keyword `volatile' does not work. Warning: valid
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-   code using `volatile' can become incorrect without. Disable with care. */
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-/* #undef volatile */