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sbindir = @sbindir@
sharedstatedir = @sharedstatedir@
srcdir = @srcdir@
sysconfdir = @sysconfdir@
target = @target@
target_alias = @target_alias@
target_cpu = @target_cpu@
target_os = @target_os@
target_vendor = @target_vendor@
top_build_prefix = @top_build_prefix@
top_builddir = @top_builddir@
top_srcdir = @top_srcdir@
lib_LTLIBRARIES = libgstruct-@LIBGSTRUCT_API_VERSION@.la
BAM_TALLY_FILES = fopen.h bool.h types.h bam.h bgzf.h \
 except.c except.h assert.c assert.h mem.c mem.h \
 intlistdef.h intlist.c intlist.h listdef.h list.c list.h \
 littleendian.c littleendian.h bigendian.c bigendian.h \
 interval.c interval.h uintlist.c uintlist.h \
 stopwatch.c stopwatch.h access.c access.h iitdef.h iit-read.c iit-read.h \
 chrom.c chrom.h genomicpos.c genomicpos.h \
 md5.c md5.h complement.h sequence.c sequence.h genome.c genome.h \
 uinttable.c uinttable.h table.c table.h \
 chrnum.c chrnum.h \
 samflags.h bamread.c bamread.h samread.c samread.h parserange.c parserange.h \
 tableuint.c tableuint.h iit-write.c iit-write.h ucharlist.c ucharlist.h \
 matchdef.h matchpool.c matchpool.h mismatchdef.h mismatchpool.c mismatchpool.h tally.c tally.h \
 translation.c translation.h expr.c expr.h bamtally.c bamtally.h \
 datadir.c datadir.h \
 getline.c getline.h getopt.c getopt1.c getopt.h bamtally_main.c

@HAVE_SAMTOOLS_LIB_TRUE@bam_tally_CFLAGS = $(AM_CFLAGS) $(PTHREAD_CFLAGS) $(SIMD_CFLAGS) $(POPCNT_FLAGS) $(SAMTOOLS_CFLAGS) -DTARGET=\"$(target)\" -DGMAPDB=\"$(GMAPDB)\"
@HAVE_SAMTOOLS_LIB_TRUE@bam_tally_LDFLAGS = $(AM_LDFLAGS) $(STATIC_LDFLAG) $(PTHREAD_CFLAGS) $(SAMTOOLS_LDFLAGS)
@HAVE_SAMTOOLS_LIB_TRUE@bam_tally_LDADD = $(PTHREAD_LIBS) $(ZLIB_LIBS) $(SAMTOOLS_LIBS)
@HAVE_SAMTOOLS_LIB_TRUE@dist_bam_tally_SOURCES = $(BAM_TALLY_FILES)
LIBGSTRUCT_LA_FILES = config.h fopen.h bool.h types.h \
 except.c except.h assert.c assert.h mem.c mem.h \
 intlistdef.h intlist.c intlist.h listdef.h list.c list.h \
 littleendian.c littleendian.h bigendian.c bigendian.h \
 interval.c interval.h uintlist.c uintlist.h \
 stopwatch.c stopwatch.h access.c access.h iitdef.h iit-read.c iit-read.h \
 complement.h chrom.c chrom.h genomicpos.c genomicpos.h \
 md5.c md5.h sequence.c sequence.h genome.c genome.h \
 uinttable.c uinttable.h table.c table.h \
 chrnum.c chrnum.h \
 samflags.h bamread.c bamread.h samread.c samread.h parserange.c parserange.h \
 tableuint.c tableuint.h iit-write.c iit-write.h ucharlist.c ucharlist.h \
 matchdef.h matchpool.c matchpool.h mismatchdef.h mismatchpool.c mismatchpool.h tally.c tally.h \
 translation.c translation.h expr.c expr.h bamtally.c bamtally.h \
 datadir.c datadir.h


# Do not add SAMTOOLS LIBS here
@HAVE_SAMTOOLS_LIB_TRUE@libgstruct_@LIBGSTRUCT_API_VERSION@_la_CFLAGS = $(AM_CFLAGS) $(PTHREAD_CFLAGS) $(SIMD_CFLAGS) $(POPCNT_FLAGS) $(SAMTOOLS_CFLAGS) -fPIC -DTARGET=\"$(target)\" -DGMAPDB=\"$(GMAPDB)\"
@HAVE_SAMTOOLS_LIB_TRUE@libgstruct_@LIBGSTRUCT_API_VERSION@_la_LDFLAGS = $(AM_LDFLAGS) $(STATIC_LDFLAG) $(PTHREAD_CFLAGS) -version-info $(LIBGSTRUCT_SO_VERSION)
@HAVE_SAMTOOLS_LIB_TRUE@libgstruct_@LIBGSTRUCT_API_VERSION@_la_LIBADD = $(PTHREAD_LIBS) $(ZLIB_LIBS)
@HAVE_SAMTOOLS_LIB_TRUE@dist_libgstruct_@LIBGSTRUCT_API_VERSION@_la_SOURCES = $(LIBGSTRUCT_LA_FILES)

#gstruct_includedir = $(includedir)/gstruct-$(LIBGSTRUCT_API_VERSION)
#gstruct_include_HEADERS = bamtally.h
gstruct_includedir = $(includedir)
gstruct_include_HEADERS = config.h fopen.h bool.h types.h \
 except.h assert.h mem.h \
 intlistdef.h intlist.h listdef.h list.h \
 littleendian.h bigendian.h \
 interval.h uintlist.h \
 stopwatch.h access.h iitdef.h iit-read.h \
 chrom.h genomicpos.h \
 md5.h complement.h sequence.h genome.h \
 uinttable.h table.h \
 chrnum.h \
 bamread.h samread.h parserange.h \
 dynprog.h dynprog_nogap.h dynprog_simd.h dynprog_cigar.h dynprog_single.h \
 tableuint.h iit-write.h ucharlist.h \
 matchdef.h matchpool.h mismatchdef.h mismatchpool.h tally.h translation.h bamtally.h datadir.h


# May want nodist_bamtally_libinclude_HEADERS = ../lib/bamtally.h
#bamtally_libincludedir = $(libdir)/bamtally-$(LIBGSTRUCT_API_VERSION)/include
#nodist_bamtally_libinclude_HEADERS = bamtally-config.h
pkgconfigdir = $(libdir)/pkgconfig
pkgconfig_DATA = ../lib/gstruct-$(LIBGSTRUCT_API_VERSION).pc
all: config.h
	$(MAKE) $(AM_MAKEFLAGS) all-am

.SUFFIXES:
.SUFFIXES: .c .lo .o .obj
$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am  $(am__configure_deps)
	@for dep in $?; do \
	  case '$(am__configure_deps)' in \
	    *$$dep*) \
	      ( cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh ) \
	        && { if test -f $@; then exit 0; else break; fi; }; \
	      exit 1;; \
	  esac; \
	done; \
	echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu src/Makefile'; \
	$(am__cd) $(top_srcdir) && \
	  $(AUTOMAKE) --gnu src/Makefile
Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
	@case '$?' in \
	  *config.status*) \
	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
	  *) \
	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
	esac;

$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh

$(top_srcdir)/configure: @MAINTAINER_MODE_TRUE@ $(am__configure_deps)
	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
$(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps)
	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
$(am__aclocal_m4_deps):

config.h: stamp-h1
	@test -f $@ || rm -f stamp-h1
	@test -f $@ || $(MAKE) $(AM_MAKEFLAGS) stamp-h1

stamp-h1: $(srcdir)/config.h.in $(top_builddir)/config.status
	@rm -f stamp-h1
	cd $(top_builddir) && $(SHELL) ./config.status src/config.h
$(srcdir)/config.h.in: @MAINTAINER_MODE_TRUE@ $(am__configure_deps) 
	($(am__cd) $(top_srcdir) && $(AUTOHEADER))
	rm -f stamp-h1
	touch $@

distclean-hdr:
	-rm -f config.h stamp-h1

install-libLTLIBRARIES: $(lib_LTLIBRARIES)
	@$(NORMAL_INSTALL)
	@list='$(lib_LTLIBRARIES)'; test -n "$(libdir)" || list=; \
	list2=; for p in $$list; do \
	  if test -f $$p; then \
	    list2="$$list2 $$p"; \
	  else :; fi; \
	done; \
	test -z "$$list2" || { \
	  echo " $(MKDIR_P) '$(DESTDIR)$(libdir)'"; \
	  $(MKDIR_P) "$(DESTDIR)$(libdir)" || exit 1; \
	  echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL) $(INSTALL_STRIP_FLAG) $$list2 '$(DESTDIR)$(libdir)'"; \
	  $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL) $(INSTALL_STRIP_FLAG) $$list2 "$(DESTDIR)$(libdir)"; \
	}

uninstall-libLTLIBRARIES:
	@$(NORMAL_UNINSTALL)
	@list='$(lib_LTLIBRARIES)'; test -n "$(libdir)" || list=; \
	for p in $$list; do \
	  $(am__strip_dir) \
	  echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$f'"; \
	  $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$f"; \
	done

clean-libLTLIBRARIES:
	-test -z "$(lib_LTLIBRARIES)" || rm -f $(lib_LTLIBRARIES)
	@list='$(lib_LTLIBRARIES)'; \
	locs=`for p in $$list; do echo $$p; done | \
	      sed 's|^[^/]*$$|.|; s|/[^/]*$$||; s|$$|/so_locations|' | \
	      sort -u`; \
	test -z "$$locs" || { \
	  echo rm -f $${locs}; \
	  rm -f $${locs}; \
	}

libgstruct-@LIBGSTRUCT_API_VERSION@.la: $(libgstruct_@LIBGSTRUCT_API_VERSION@_la_OBJECTS) $(libgstruct_@LIBGSTRUCT_API_VERSION@_la_DEPENDENCIES) $(EXTRA_libgstruct_@LIBGSTRUCT_API_VERSION@_la_DEPENDENCIES) 
	$(AM_V_CCLD)$(libgstruct_@LIBGSTRUCT_API_VERSION@_la_LINK) -rpath $(libdir) $(libgstruct_@LIBGSTRUCT_API_VERSION@_la_OBJECTS) $(libgstruct_@LIBGSTRUCT_API_VERSION@_la_LIBADD) $(LIBS)
install-binPROGRAMS: $(bin_PROGRAMS)
	@$(NORMAL_INSTALL)
	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
	if test -n "$$list"; then \
	  echo " $(MKDIR_P) '$(DESTDIR)$(bindir)'"; \
	  $(MKDIR_P) "$(DESTDIR)$(bindir)" || exit 1; \
	fi; \
	for p in $$list; do echo "$$p $$p"; done | \
	sed 's/$(EXEEXT)$$//' | \
	while read p p1; do if test -f $$p \
	 || test -f $$p1 \
	  ; then echo "$$p"; echo "$$p"; else :; fi; \
	done | \
	sed -e 'p;s,.*/,,;n;h' \
	    -e 's|.*|.|' \
	    -e 'p;x;s,.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/' | \
	sed 'N;N;N;s,\n, ,g' | \
	$(AWK) 'BEGIN { files["."] = ""; dirs["."] = 1 } \
	  { d=$$3; if (dirs[d] != 1) { print "d", d; dirs[d] = 1 } \
	    if ($$2 == $$4) files[d] = files[d] " " $$1; \
	    else { print "f", $$3 "/" $$4, $$1; } } \
	  END { for (d in files) print "f", d, files[d] }' | \
	while read type dir files; do \
	    if test "$$dir" = .; then dir=; else dir=/$$dir; fi; \
	    test -z "$$files" || { \
	    echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files '$(DESTDIR)$(bindir)$$dir'"; \
	    $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files "$(DESTDIR)$(bindir)$$dir" || exit $$?; \
	    } \
	; done

uninstall-binPROGRAMS:
	@$(NORMAL_UNINSTALL)
	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
	files=`for p in $$list; do echo "$$p"; done | \
	  sed -e 'h;s,^.*/,,;s/$(EXEEXT)$$//;$(transform)' \
	      -e 's/$$/$(EXEEXT)/' \
	`; \
	test -n "$$list" || exit 0; \
	echo " ( cd '$(DESTDIR)$(bindir)' && rm -f" $$files ")"; \
	cd "$(DESTDIR)$(bindir)" && rm -f $$files

clean-binPROGRAMS:
	@list='$(bin_PROGRAMS)'; test -n "$$list" || exit 0; \
	echo " rm -f" $$list; \
	rm -f $$list || exit $$?; \
	test -n "$(EXEEXT)" || exit 0; \
	list=`for p in $$list; do echo "$$p"; done | sed 's/$(EXEEXT)$$//'`; \
	echo " rm -f" $$list; \
	rm -f $$list

bam_tally$(EXEEXT): $(bam_tally_OBJECTS) $(bam_tally_DEPENDENCIES) $(EXTRA_bam_tally_DEPENDENCIES) 
	@rm -f bam_tally$(EXEEXT)
	$(AM_V_CCLD)$(bam_tally_LINK) $(bam_tally_OBJECTS) $(bam_tally_LDADD) $(LIBS)

mostlyclean-compile:
	-rm -f *.$(OBJEXT)

distclean-compile:
	-rm -f *.tab.c

@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-access.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-assert.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-bamread.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-bamtally.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-bamtally_main.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-bigendian.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-chrnum.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-chrom.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-datadir.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-except.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-expr.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-genome.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-genomicpos.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-getline.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-getopt.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-getopt1.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-iit-read.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-iit-write.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-interval.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-intlist.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-list.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-littleendian.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-matchpool.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-md5.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-mem.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-mismatchpool.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-parserange.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-samread.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-sequence.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-stopwatch.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-table.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-tableuint.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-tally.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-translation.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-ucharlist.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-uintlist.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/bam_tally-uinttable.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-access.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-assert.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-bamread.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-bamtally.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-bigendian.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-chrnum.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-chrom.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-datadir.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-except.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-expr.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-genome.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-genomicpos.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-iit-read.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-iit-write.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-interval.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-intlist.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-list.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-littleendian.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-matchpool.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-md5.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-mem.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-mismatchpool.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-parserange.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-samread.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-sequence.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-stopwatch.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-table.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-tableuint.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-tally.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-translation.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-ucharlist.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-uintlist.Plo@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/libgstruct_@LIBGSTRUCT_API_VERSION@_la-uinttable.Plo@am__quote@

.c.o:
@am__fastdepCC_TRUE@	$(AM_V_CC)$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
@am__fastdepCC_TRUE@	$(AM_V_at)$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
@AMDEP_TRUE@@am__fastdepCC_FALSE@	$(AM_V_CC)source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCC_FALSE@	$(AM_V_CC@am__nodep@)$(COMPILE) -c -o $@ $<

.c.obj:
@am__fastdepCC_TRUE@	$(AM_V_CC)$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ `$(CYGPATH_W) '$<'`
@am__fastdepCC_TRUE@	$(AM_V_at)$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
@AMDEP_TRUE@@am__fastdepCC_FALSE@	$(AM_V_CC)source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCC_FALSE@	$(AM_V_CC@am__nodep@)$(COMPILE) -c -o $@ `$(CYGPATH_W) '$<'`

.c.lo:
@am__fastdepCC_TRUE@	$(AM_V_CC)$(LTCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
@am__fastdepCC_TRUE@	$(AM_V_at)$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-md5.lo: md5.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-sequence.lo: sequence.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-genome.lo: genome.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-uinttable.lo: uinttable.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-table.lo: table.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-chrnum.lo: chrnum.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-bamread.lo: bamread.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-parserange.lo: parserange.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-tableuint.lo: tableuint.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-iit-write.lo: iit-write.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-ucharlist.lo: ucharlist.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-matchpool.lo: matchpool.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-bamtally.lo: bamtally.c
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libgstruct_@LIBGSTRUCT_API_VERSION@_la-datadir.lo: datadir.c
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bam_tally-except.o: except.c
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bam_tally-except.obj: except.c
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bam_tally-assert.o: assert.c
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bam_tally-list.o: list.c
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bam_tally-list.obj: list.c
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bam_tally-littleendian.o: littleendian.c
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bam_tally-genome.o: genome.c
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bam_tally-uinttable.o: uinttable.c
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bam_tally-table.o: table.c
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bam_tally-chrnum.o: chrnum.c
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bam_tally-bamread.o: bamread.c
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bam_tally-bamread.obj: bamread.c
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bam_tally-samread.o: samread.c
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bam_tally-parserange.o: parserange.c
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bam_tally-iit-write.o: iit-write.c
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bam_tally-tally.o: tally.c
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bam_tally-bamtally.o: bamtally.c
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bam_tally-datadir.o: datadir.c
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