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\name{TP53Genome}
\alias{TP53Genome}
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\alias{TP53Which}
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\title{
Demo genome around TP53
}
\description{
Returns a \code{\linkS4class{GmapGenome}} object consisting of the
UCSC hg19 sequence centered on the region of the TP53 gene, with 1 Mb
flanking sequence on each side. This is intended as a
test/demonstration genome and can be used, e.g., in conjunction with
the \code{LungCancerLines} data package.
}
\usage{
TP53Genome()
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TP53Which()
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}
\value{
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For \code{TP53Genome}, a \code{GmapGenome} object. If this is the
first time the user has run this function, a side-effect will be the
generation of an on-disk genome index, under the name
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\dQuote{TP53_demo_VERSION} in the default genome directory, where
\code{VERSION} is the version of the TxDb package providing the bounds
of the P53 gene.
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For \code{TP53Which}, a \code{GRanges} of the extents of the TP53
gene, translated to the space of \code{TP53Genome}.
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}
\author{
Michael Lawrence, Cory Barr
}
\examples{
TP53Genome()
}
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