# ggtreeSpace
This package is a comprehensive visualization tool specifically designed for
exploring phylomorphospace. It not only simplifies the process of generating
phylomorphospace, but also enhances it with the capability to add graphic
layers to the plot with grammar of graphics to create fully annotated
phylomorphospaces.
## Installation
The released version from `Bioconductor`
```r
if (!require("BiocManager"))
install.packages("BiocManager")
BiocManager::install("ggtreeSpace")
```
Alternatively, you can grab the development version from github using
devtools:
``` r
if (!requireNamespace("devtools", quietly=TRUE))
install.packages("devtools")
devtools::install_github("YuLab-SMU/ggtreeSpace")
```
## Quick Example
``` r
library(ggtree)
library(phytools)
library(ggtreeSpace)
tr <- rtree(15)
td <- fastBM(tr, nsim = 2)
ggtreespace(tr, td) +
geom_tippoint()
```
## Author
- [Guangchuang Yu](https://guangchuangyu.github.io) Professor, PI
- [Lin Li](https://github.com/SanL20) Master’s Student
