1. ggtree
  2. man
  3. geom_aline.Rd
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rename size aesthetic according to ggplot2 (3.4.0)

xiangpin authored on 07/07/2022 12:57:13
Showing 1 changed files
man/geom_aline.Rd
History View file @ 69f2dbbf
... ... 
@@ -4,14 +4,14 @@
4 4 
 \alias{geom_aline}
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 \title{geom_aline}
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 \usage{
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-geom_aline(mapping = NULL, linetype = "dotted", size = 1, ...)
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+geom_aline(mapping = NULL, linetype = "dotted", linewidth = 1, ...)
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 }
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 \arguments{
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 \item{mapping}{aes mapping}
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 \item{linetype}{set line type of the line, defaults to "dotted"}
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-\item{size}{set line size of the line, defaults to 1}
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+\item{linewidth}{set width of the line, defaults to 1}
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 \item{...}{additional parameter}
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 }
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update man files and fixed R check

Guangchuang Yu authored on 23/03/2022 04:13:34
Showing 1 changed files
man/geom_aline.Rd
History View file @ fbeaa25d
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@@ -9,9 +9,9 @@ geom_aline(mapping = NULL, linetype = "dotted", size = 1, ...)
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 \arguments{
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 \item{mapping}{aes mapping}
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-\item{linetype}{line type}
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+\item{linetype}{set line type of the line, defaults to "dotted"}
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-\item{size}{line size}
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+\item{size}{set line size of the line, defaults to 1}
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 \item{...}{additional parameter}
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 }
... ... 
@@ -19,7 +19,11 @@ geom_aline(mapping = NULL, linetype = "dotted", size = 1, ...)
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 aline layer
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 }
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 \description{
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-add horizontal align lines
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+add horizontal align lines layer to a tree
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+}
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+\details{
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+'geom_aline'align all tips to the longest one by adding
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+padding characters to the right side of the tip.
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 }
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 \author{
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 Yu Guangchuang
Browse code

geom_motif #148

guangchuang yu authored on 22/08/2017 08:22:37
Showing 1 changed files
man/geom_aline.Rd
History View file @ 363c0555
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@@ -24,4 +24,3 @@ add horizontal align lines
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 \author{
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 Yu Guangchuang
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 }
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-
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update docs

guangchuang yu authored on 16/08/2017 02:36:13
Showing 1 changed files
man/geom_aline.Rd
History View file @ f0e199ad
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@@ -24,3 +24,4 @@ add horizontal align lines
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 \author{
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 Yu Guangchuang
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 }
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+
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add extend parameter in geom_cladelabel

guangchuang yu authored on 26/07/2017 02:13:53
Showing 1 changed files
man/geom_aline.Rd
History View file @ 353dfa09
... ... 
@@ -24,4 +24,3 @@ add horizontal align lines
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 \author{
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 Yu Guangchuang
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 }
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-
Browse code

lots updates

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@111813 bc3139a8-67e5-0310-9ffc-ced21a209358

Guangchuang Yu authored on 22/12/2015 04:08:02
Showing 1 changed files
man/geom_aline.Rd
History View file @ 6c9cd355
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@@ -1,4 +1,4 @@
1 
-% Generated by roxygen2 (4.1.1): do not edit by hand
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+% Generated by roxygen2: do not edit by hand
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 % Please edit documentation in R/geom_segment.R
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 \name{geom_aline}
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 \alias{geom_aline}
Browse code

update according to changes of ggplot2

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@107869 bc3139a8-67e5-0310-9ffc-ced21a209358

Guangchuang Yu authored on 28/08/2015 13:39:22
Showing 1 changed files
man/geom_aline.Rd
History View file @ 1d4d6914
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@@ -1,14 +1,18 @@
1 1 
 % Generated by roxygen2 (4.1.1): do not edit by hand
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-% Please edit documentation in R/ggtree.R
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+% Please edit documentation in R/geom_segment.R
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 \name{geom_aline}
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 \alias{geom_aline}
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 \title{geom_aline}
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 \usage{
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-geom_aline(linetype = "dashed", ...)
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+geom_aline(mapping = NULL, linetype = "dotted", size = 1, ...)
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 }
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 \arguments{
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+\item{mapping}{aes mapping}
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+
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 \item{linetype}{line type}
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+\item{size}{line size}
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+
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 \item{...}{additional parameter}
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 }
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 \value{
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@@ -17,11 +21,6 @@ aline layer
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 \description{
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 add horizontal align lines
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 }
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-\examples{
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-require(ape)
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-tr <- rtree(10)
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-ggtree(tr) + geom_tiplab(align=TRUE) + geom_aline()
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-}
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 \author{
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 Yu Guangchuang
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 }
Browse code

Commit made by the Bioconductor Git-SVN bridge.

Commit id: ca17acc22b608158936b9c2790bff2f7504f38d9

add author



git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@103112 bc3139a8-67e5-0310-9ffc-ced21a209358

Guangchuang Yu authored on 27/04/2015 03:15:40
Showing 1 changed files
man/geom_aline.Rd
History View file @ b893400f
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@@ -1,4 +1,4 @@
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-% Generated by roxygen2 (4.1.0): do not edit by hand
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+% Generated by roxygen2 (4.1.1): do not edit by hand
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 % Please edit documentation in R/ggtree.R
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 \name{geom_aline}
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 \alias{geom_aline}
Browse code

Adds ggtree/ seq2pathway/ sidap/ to the repos.

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@98340 bc3139a8-67e5-0310-9ffc-ced21a209358

Marc Carlson authored on 14/01/2015 21:22:07
Showing 1 changed files
man/geom_aline.Rd
History View file @ 0c8aaf33
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new file mode 100644
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@@ -0,0 +1,28 @@
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+% Generated by roxygen2 (4.1.0): do not edit by hand
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+% Please edit documentation in R/ggtree.R
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+\name{geom_aline}
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+\alias{geom_aline}
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+\title{geom_aline}
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+\usage{
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+geom_aline(linetype = "dashed", ...)
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+}
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+\arguments{
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+\item{linetype}{line type}
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+
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+\item{...}{additional parameter}
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+}
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+\value{
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+aline layer
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+}
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+\description{
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+add horizontal align lines
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+}
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+\examples{
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+require(ape)
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+tr <- rtree(10)
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+ggtree(tr) + geom_tiplab(align=TRUE) + geom_aline()
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+}
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+\author{
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+Yu Guangchuang
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+}
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+