GuangchuangYu authored on 20/12/2016 16:39:07
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-% Generated by roxygen2: do not edit by hand |
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-% Please edit documentation in R/phangorn.R |
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-\name{phyPML}
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-\alias{phyPML}
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-\title{treeAnno.pml}
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-\usage{
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-phyPML(pmlTree, type = "ml") |
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-} |
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-\arguments{
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-\item{pmlTree}{tree in pml object, output of phangorn::optim.pml}
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- |
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-\item{type}{one of 'ml' and 'bayes' for inferring ancestral sequences}
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-} |
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-\value{
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-phangorn object |
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-} |
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-\description{
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-tree annotation of sequence substitution by comparing to parent node |
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-} |
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-\author{
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-Yu Guangchuang |
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-} |
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- |
git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@111815 bc3139a8-67e5-0310-9ffc-ced21a209358
g.yu authored on 22/12/2015 04:13:13
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+% Generated by roxygen2: do not edit by hand |
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+% Please edit documentation in R/phangorn.R |
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+\name{phyPML}
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+\alias{phyPML}
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+\title{treeAnno.pml}
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+\usage{
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+phyPML(pmlTree, type = "ml") |
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+} |
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+\arguments{
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+\item{pmlTree}{tree in pml object, output of phangorn::optim.pml}
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+ |
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+\item{type}{one of 'ml' and 'bayes' for inferring ancestral sequences}
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+} |
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+\value{
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+phangorn object |
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+} |
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+\description{
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+tree annotation of sequence substitution by comparing to parent node |
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+} |
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+\author{
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+Yu Guangchuang |
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+} |
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+ |