Guangchuang Yu authored on 23/03/2022 04:13:34
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@@ -19,12 +19,36 @@ layout_fan(angle = 180) |
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layout_dendrogram() |
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} |
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\arguments{
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-\item{xlim}{x limits}
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+\item{xlim}{setting x limits, which will affect the center space of the tree}
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\item{angle}{open tree at specific angle}
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} |
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\description{
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-tree layout |
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+transform circular/fan layout to rectangular layout |
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+ |
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+transform rectangular layout to circular layout |
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+ |
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+transform rectangular/circular layout to inward circular layout |
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+ |
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+transform rectangular/circular layout to fan layout |
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+ |
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+transform rectangular layout to dendrogram layout |
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+} |
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+\examples{
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+tree <- rtree(20) |
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+p <- ggtree(tree, layout = "circular") + layout_rectangular() |
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+tree <- rtree(20) |
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+p <- ggtree(tree) |
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+p + layout_circular() |
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+tree <- rtree(20) |
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+p <- ggtree(tree) |
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+p + layout_inward_circular(xlim=4) + geom_tiplab(hjust=1) |
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+tree <- rtree(20) |
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+p <- ggtree(tree) |
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+p + layout_fan(angle=90) |
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+tree <- rtree(20) |
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+p <- ggtree(tree) |
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+p + p + layout_dendrogram() |
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} |
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\author{
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Guangchuang Yu |
Guangchuang Yu authored on 16/07/2020 10:49:58
Guangchuang Yu authored on 16/07/2020 10:30:54
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@@ -3,6 +3,7 @@ |
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\name{layout_rectangular}
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\alias{layout_rectangular}
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\alias{layout_circular}
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+\alias{layout_inward_circular}
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\alias{layout_fan}
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\alias{layout_dendrogram}
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\title{layout_rectangular}
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@@ -11,6 +12,8 @@ layout_rectangular() |
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layout_circular() |
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+layout_inward_circular(xlim = NULL) |
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+ |
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layout_fan(angle = 180) |
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layout_dendrogram() |
Guangchuang Yu authored on 24/07/2019 07:38:11
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new file mode 100644 |
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@@ -0,0 +1,26 @@ |
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+% Generated by roxygen2: do not edit by hand |
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+% Please edit documentation in R/layout.R |
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+\name{layout_rectangular}
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+\alias{layout_rectangular}
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+\alias{layout_circular}
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+\alias{layout_fan}
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+\alias{layout_dendrogram}
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+\title{layout_rectangular}
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+\usage{
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+layout_rectangular() |
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+ |
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+layout_circular() |
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+ |
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+layout_fan(angle = 180) |
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+ |
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+layout_dendrogram() |
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+} |
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+\arguments{
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+\item{angle}{open tree at specific angle}
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+} |
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+\description{
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+tree layout |
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+} |
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+\author{
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+Guangchuang Yu |
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+} |