Browse code

remove functions

Guangchuang Yu authored on 28/07/2020 07:02:57
Showing 1 changed files
1 1
deleted file mode 100644
... ...
@@ -1,40 +0,0 @@
1
-% Generated by roxygen2: do not edit by hand
2
-% Please edit documentation in R/defunct.R
3
-\name{annotation_image}
4
-\alias{annotation_image}
5
-\title{annotation_image}
6
-\usage{
7
-annotation_image(
8
-  tree_view,
9
-  img_info,
10
-  width = 0.1,
11
-  align = TRUE,
12
-  linetype = "dotted",
13
-  linesize = 1,
14
-  offset = 0
15
-)
16
-}
17
-\arguments{
18
-\item{tree_view}{tree view}
19
-
20
-\item{img_info}{data.frame with first column of taxa name and second column of image names}
21
-
22
-\item{width}{width of the image to be plotted in image}
23
-
24
-\item{align}{logical}
25
-
26
-\item{linetype}{line type if align = TRUE}
27
-
28
-\item{linesize}{line size if align = TRUE}
29
-
30
-\item{offset}{offset of image from the tree view}
31
-}
32
-\value{
33
-tree view
34
-}
35
-\description{
36
-annotation taxa with images
37
-}
38
-\author{
39
-Guangchuang Yu
40
-}
Browse code

clip="off" and update docs

Guangchuang Yu authored on 06/12/2019 03:01:17
Showing 1 changed files
... ...
@@ -4,8 +4,15 @@
4 4
 \alias{annotation_image}
5 5
 \title{annotation_image}
6 6
 \usage{
7
-annotation_image(tree_view, img_info, width = 0.1, align = TRUE,
8
-  linetype = "dotted", linesize = 1, offset = 0)
7
+annotation_image(
8
+  tree_view,
9
+  img_info,
10
+  width = 0.1,
11
+  align = TRUE,
12
+  linetype = "dotted",
13
+  linesize = 1,
14
+  offset = 0
15
+)
9 16
 }
10 17
 \arguments{
11 18
 \item{tree_view}{tree view}
Browse code

ggtree with image files

guangchuang yu authored on 04/12/2017 11:45:07
Showing 1 changed files
... ...
@@ -1,5 +1,5 @@
1 1
 % Generated by roxygen2: do not edit by hand
2
-% Please edit documentation in R/phylopic.R
2
+% Please edit documentation in R/defunct.R
3 3
 \name{annotation_image}
4 4
 \alias{annotation_image}
5 5
 \title{annotation_image}
Browse code

geom_motif #148

guangchuang yu authored on 22/08/2017 08:22:37
Showing 1 changed files
... ...
@@ -31,4 +31,3 @@ annotation taxa with images
31 31
 \author{
32 32
 Guangchuang Yu
33 33
 }
34
-
Browse code

update docs

guangchuang yu authored on 16/08/2017 02:36:13
Showing 1 changed files
... ...
@@ -31,3 +31,4 @@ annotation taxa with images
31 31
 \author{
32 32
 Guangchuang Yu
33 33
 }
34
+
Browse code

add extend parameter in geom_cladelabel

guangchuang yu authored on 26/07/2017 02:13:53
Showing 1 changed files
... ...
@@ -31,4 +31,3 @@ annotation taxa with images
31 31
 \author{
32 32
 Guangchuang Yu
33 33
 }
34
-
Browse code

lots updates

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@111813 bc3139a8-67e5-0310-9ffc-ced21a209358

Guangchuang Yu authored on 22/12/2015 04:08:02
Showing 1 changed files
... ...
@@ -1,4 +1,4 @@
1
-% Generated by roxygen2 (4.1.1): do not edit by hand
1
+% Generated by roxygen2: do not edit by hand
2 2
 % Please edit documentation in R/phylopic.R
3 3
 \name{annotation_image}
4 4
 \alias{annotation_image}
Browse code

annotation_image

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@106969 bc3139a8-67e5-0310-9ffc-ced21a209358

Guangchuang Yu authored on 01/08/2015 13:12:53
Showing 1 changed files
1 1
new file mode 100644
... ...
@@ -0,0 +1,34 @@
1
+% Generated by roxygen2 (4.1.1): do not edit by hand
2
+% Please edit documentation in R/phylopic.R
3
+\name{annotation_image}
4
+\alias{annotation_image}
5
+\title{annotation_image}
6
+\usage{
7
+annotation_image(tree_view, img_info, width = 0.1, align = TRUE,
8
+  linetype = "dotted", linesize = 1, offset = 0)
9
+}
10
+\arguments{
11
+\item{tree_view}{tree view}
12
+
13
+\item{img_info}{data.frame with first column of taxa name and second column of image names}
14
+
15
+\item{width}{width of the image to be plotted in image}
16
+
17
+\item{align}{logical}
18
+
19
+\item{linetype}{line type if align = TRUE}
20
+
21
+\item{linesize}{line size if align = TRUE}
22
+
23
+\item{offset}{offset of image from the tree view}
24
+}
25
+\value{
26
+tree view
27
+}
28
+\description{
29
+annotation taxa with images
30
+}
31
+\author{
32
+Guangchuang Yu
33
+}
34
+