1. ggtree
  2. DESCRIPTION
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bump x.y.z version to odd y following creation of RELEASE_3_17 branch

J Wokaty authored on 25/04/2023 14:37:21
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DESCRIPTION
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.8.0
4 
+Version: 3.9.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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bump x.y.z version to even y prior to creation of RELEASE_3_17 branch

J Wokaty authored on 25/04/2023 14:37:21
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DESCRIPTION
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.7.2
4 
+Version: 3.8.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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fixed R check

Guangchuang Yu authored on 04/04/2023 03:12:42
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.7.1.003
4 
+Version: 3.7.2
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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ggtree supports dendro object

Guangchuang Yu authored on 02/03/2023 02:23:07
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DESCRIPTION
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.7.1.002
4 
+Version: 3.7.1.003
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
... ... 
@@ -63,5 +63,5 @@ BugReports: https://github.com/YuLab-SMU/ggtree/issues
63 63 
 Packaged: 2014-12-03 08:16:14 UTC; root
64 64 
 biocViews: Alignment, Annotation, Clustering, DataImport,
65 65 
     MultipleSequenceAlignment, Phylogenetics, ReproducibleResearch, Software, Visualization
66 
-RoxygenNote: 7.2.2
66 
+RoxygenNote: 7.2.3
67 67 
 Roxygen: list(markdown = TRUE)
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typo

Guangchuang Yu authored on 21/11/2022 02:56:09
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DESCRIPTION
History View file @ 6bc28f39
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@@ -63,5 +63,5 @@ BugReports: https://github.com/YuLab-SMU/ggtree/issues
63 63 
 Packaged: 2014-12-03 08:16:14 UTC; root
64 64 
 biocViews: Alignment, Annotation, Clustering, DataImport,
65 65 
     MultipleSequenceAlignment, Phylogenetics, ReproducibleResearch, Software, Visualization
66 
-RoxygenNote: 7.2.1
66 
+RoxygenNote: 7.2.2
67 67 
 Roxygen: list(markdown = TRUE)
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update theme_dendrogram

Guangchuang Yu authored on 21/11/2022 02:28:11
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DESCRIPTION
History View file @ 75079553
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.7.1.001
4 
+Version: 3.7.1.002
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
... ... 
@@ -31,7 +31,7 @@ Imports:
31 31 
     methods,
32 32 
     purrr,
33 33 
     rlang,
34 
-    ggfun (>= 0.0.6),
34 
+    ggfun (>= 0.0.9),
35 35 
     yulab.utils,
36 36 
     tidyr,
37 37 
     tidytree (>= 0.3.9),
Browse code

update docs

Guangchuang Yu authored on 10/11/2022 10:01:17
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DESCRIPTION
History View file @ b7ef83eb
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.7.1
4 
+Version: 3.7.1.001
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
Browse code

relace warning_wrap with cli package

xiangpin authored on 09/11/2022 13:34:24
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DESCRIPTION
History View file @ c3621530
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@@ -38,7 +38,8 @@ Imports:
38 38 
     treeio (>= 1.8.0),
39 39 
     utils,
40 40 
     scales,
41 
-    stats
41 
+    stats,
42 
+    cli
42 43 
 Suggests:
43 44 
     emojifont,
44 45 
     ggimage,
Browse code

bump version

Guangchuang Yu authored on 06/11/2022 14:52:54
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DESCRIPTION
History View file @ 5fdc91ec
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.7.0.001
4 
+Version: 3.7.1
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
Browse code

Merge pull request #543 from xiangpin/master

update ggtree to compatible with the ggplot2 3.4.0

Guangchuang Yu authored on 06/11/2022 14:51:54 • GitHub committed on 06/11/2022 14:51:54
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geom_hilight options

Guangchuang Yu authored on 06/11/2022 07:48:45
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DESCRIPTION
History View file @ d5b302e2
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.7.0
4 
+Version: 3.7.0.001
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
Browse code

Merge branch 'master' into dev_for_new_ggplot2

xiangpin authored on 06/11/2022 03:25:04
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bump x.y.z version to odd y following creation of RELEASE_3_16 branch

J Wokaty authored on 01/11/2022 15:11:01
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DESCRIPTION
History View file @ 60c639c2
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.6.0
4 
+Version: 3.7.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_16 branch

J Wokaty authored on 01/11/2022 15:11:01
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DESCRIPTION
History View file @ 9e6481c5
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.3
4 
+Version: 3.6.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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Merge branch 'master' into dev_for_new_ggplot2

xiangpin authored on 23/08/2022 12:39:47
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bump version

Guangchuang Yu authored on 19/08/2022 08:36:03
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DESCRIPTION
History View file @ 40fd4780
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.2.992
4 
+Version: 3.5.3
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
Browse code

update docs

Guangchuang Yu authored on 15/08/2022 10:06:17
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DESCRIPTION
History View file @ 99e15b93
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.2.991
4 
+Version: 3.5.2.992
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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update citation

Guangchuang Yu authored on 13/08/2022 09:45:00
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DESCRIPTION
History View file @ e6a56b47
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.2
4 
+Version: 3.5.2.991
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
... ... 
@@ -57,7 +57,7 @@ VignetteBuilder: knitr
57 57 
 ByteCompile: true
58 58 
 Encoding: UTF-8
59 59 
 License: Artistic-2.0
60 
-URL: https://yulab-smu.top/treedata-book/ (book), http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12628 (paper)
60 
+URL: https://www.amazon.com/Integration-Manipulation-Visualization-Phylogenetic-Computational-ebook/dp/B0B5NLZR1Z/ (book), http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12628 (paper)
61 61 
 BugReports: https://github.com/YuLab-SMU/ggtree/issues
62 62 
 Packaged: 2014-12-03 08:16:14 UTC; root
63 63 
 biocViews: Alignment, Annotation, Clustering, DataImport,
Browse code

linkage support

Guangchuang Yu authored on 11/08/2022 09:03:41
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DESCRIPTION
History View file @ ab464358
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.1.902
4 
+Version: 3.5.2
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
... ... 
@@ -37,7 +37,8 @@ Imports:
37 37 
     tidytree (>= 0.3.9),
38 38 
     treeio (>= 1.8.0),
39 39 
     utils,
40 
-    scales
40 
+    scales,
41 
+    stats
41 42 
 Suggests:
42 43 
     emojifont,
43 44 
     ggimage,
... ... 
@@ -47,7 +48,6 @@ Suggests:
47 48 
     knitr,
48 49 
     prettydoc,
49 50 
     rmarkdown,
50 
-    stats,
51 51 
     testthat,
52 52 
     tibble,
53 53 
     glue
... ... 
@@ -62,5 +62,5 @@ BugReports: https://github.com/YuLab-SMU/ggtree/issues
62 62 
 Packaged: 2014-12-03 08:16:14 UTC; root
63 63 
 biocViews: Alignment, Annotation, Clustering, DataImport,
64 64 
     MultipleSequenceAlignment, Phylogenetics, ReproducibleResearch, Software, Visualization
65 
-RoxygenNote: 7.2.0
65 
+RoxygenNote: 7.2.1
66 66 
 Roxygen: list(markdown = TRUE)
Browse code

update docs

Guangchuang Yu authored on 19/07/2022 03:13:41
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DESCRIPTION
History View file @ 4c620351
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.1.901
4 
+Version: 3.5.1.902
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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Merge remote-tracking branch 'upstream/master' into dev_for_new_ggplot2

xiangpin authored on 13/07/2022 02:25:14
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update

Guangchuang Yu authored on 09/07/2022 07:33:16
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DESCRIPTION
History View file @ 78138d3b
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.1.900
4 
+Version: 3.5.1.901
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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rename size aesthetic according to ggplot2 (3.4.0)

xiangpin authored on 07/07/2022 12:57:13
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DESCRIPTION
History View file @ 69f2dbbf
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@@ -25,7 +25,7 @@ Imports:
25 25 
     ape,
26 26 
     aplot,
27 27 
     dplyr,
28 
-    ggplot2 (>= 3.0.0),
28 
+    ggplot2 (> 3.3.6),
29 29 
     grid,
30 30 
     magrittr,
31 31 
     methods,
Browse code

fix bug of layoutEqualAngle

xiangpin authored on 06/07/2022 13:33:17
Showing 1 changed files
DESCRIPTION
History View file @ d2fa81f7
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@@ -62,5 +62,5 @@ BugReports: https://github.com/YuLab-SMU/ggtree/issues
62 62 
 Packaged: 2014-12-03 08:16:14 UTC; root
63 63 
 biocViews: Alignment, Annotation, Clustering, DataImport,
64 64 
     MultipleSequenceAlignment, Phylogenetics, ReproducibleResearch, Software, Visualization
65 
-RoxygenNote: 7.1.2
65 
+RoxygenNote: 7.2.0
66 66 
 Roxygen: list(markdown = TRUE)
Browse code

update docs

Guangchuang Yu authored on 23/06/2022 03:18:21
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DESCRIPTION
History View file @ 2aad9c49
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.1
4 
+Version: 3.5.1.900
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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as.phylo.hclust2

Guangchuang Yu authored on 21/06/2022 08:59:44
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DESCRIPTION
History View file @ aa1d7126
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.0.902
4 
+Version: 3.5.1
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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update

Guangchuang Yu authored on 20/06/2022 07:13:19
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DESCRIPTION
History View file @ d91c9b22
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.0.901
4 
+Version: 3.5.0.902
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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update_edge_hclust

Guangchuang Yu authored on 04/06/2022 17:02:02
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DESCRIPTION
History View file @ 68b65a4f
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.0.900
4 
+Version: 3.5.0.901
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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update docs, #496, #497

Guangchuang Yu authored on 29/04/2022 08:02:38
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DESCRIPTION
History View file @ 6343f7a1
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.5.0
4 
+Version: 3.5.0.900
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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bump x.y.z version to odd y following creation of RELEASE_3_15 branch

Nitesh Turaga authored on 26/04/2022 15:23:33
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DESCRIPTION
History View file @ d87fe638
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.4.0
4 
+Version: 3.5.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_15 branch

Nitesh Turaga authored on 26/04/2022 15:23:33
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DESCRIPTION
History View file @ 23f08a3d
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.3.3
4 
+Version: 3.4.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
Browse code

bump version

Guangchuang Yu authored on 24/04/2022 02:10:02
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DESCRIPTION
History View file @ 8f945e97
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.3.2
4 
+Version: 3.3.3
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
Browse code

introduce to.bottom in geom_hilight

xiangpin authored on 22/04/2022 04:10:04
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DESCRIPTION
History View file @ d1cb2d91
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@@ -42,6 +42,7 @@ Suggests:
42 42 
     emojifont,
43 43 
     ggimage,
44 44 
     ggplotify,
45 
+    shadowtext,
45 46 
     grDevices,
46 47 
     knitr,
47 48 
     prettydoc,
Browse code

bump version

Guangchuang Yu authored on 14/04/2022 01:47:54
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DESCRIPTION
History View file @ 4b0da351
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.3.1.901
4 
+Version: 3.3.2
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
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mv identify to ggfun

Guangchuang Yu authored on 01/04/2022 08:21:52
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DESCRIPTION
History View file @ 7e05bcf0
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@@ -23,7 +23,7 @@ Depends:
23 23 
     R (>= 3.5.0)
24 24 
 Imports:
25 25 
     ape,
26 
-    aplot (>= 0.1.3),
26 
+    aplot,
27 27 
     dplyr,
28 28 
     ggplot2 (>= 3.0.0),
29 29 
     grid,
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@@ -31,7 +31,7 @@ Imports:
31 31 
     methods,
32 32 
     purrr,
33 33 
     rlang,
34 
-    ggfun,
34 
+    ggfun (>= 0.0.6),
35 35 
     yulab.utils,
36 36 
     tidyr,
37 37 
     tidytree (>= 0.3.9),
Browse code

update identify() method

Guangchuang Yu authored on 01/04/2022 02:45:58
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DESCRIPTION
History View file @ c94a8385
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.3.1.900
4 
+Version: 3.3.1.901
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 7 
             comment = c(ORCID = "0000-0002-6485-8781")),
... ... 
@@ -23,7 +23,7 @@ Depends:
23 23 
     R (>= 3.5.0)
24 24 
 Imports:
25 25 
     ape,
26 
-    aplot (>= 0.0.4),
26 
+    aplot (>= 0.1.3),
27 27 
     dplyr,
28 28 
     ggplot2 (>= 3.0.0),
29 29 
     grid,
Browse code

update man files and fixed R check

Guangchuang Yu authored on 23/03/2022 04:13:34
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DESCRIPTION
History View file @ fbeaa25d
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@@ -1,15 +1,18 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.3.1
4 
+Version: 3.3.1.900
5 5 
 Authors@R: c(
6 
-       person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
6 
+       person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
7 
+            comment = c(ORCID = "0000-0002-6485-8781")),
7 8 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
8 
-       person("Shuangbin", "Xu",       email = "xshuangbin@163.com",      role = "aut", comment = c(ORCID="0000-0003-3513-5362")),
9 
-       person("Yonghe", "Xia",         email = "xiayh17@gmail.com",       role = "ctb"),
10 
-       person("Justin", "Silverman",   email = "jsilve24@gmail.com",      role = "ctb"),
9 
+       person("Shuangbin", "Xu",       email = "xshuangbin@163.com",      role = "aut",
10 
+            comment = c(ORCID="0000-0003-3513-5362")),
11 
+       person("Lin", " Li",            email = "williamlee2220@qq.com",   role = "ctb"),
11 12 
        person("Bradley", "Jones",      email = "bjones@cfenet.ubc.ca",    role = "ctb"),
13 
+       person("Justin", "Silverman",   email = "jsilve24@gmail.com",      role = "ctb"),
12 14 
        person("Watal M.", "Iwasaki",   email = "heavy.watal@gmail.com",   role = "ctb"),
15 
+       person("Yonghe", "Xia",         email = "xiayh17@gmail.com",       role = "ctb"),
13 16 
        person("Ruizhu", "Huang",       email = "ruizhuRH@gmail.com",      role = "ctb")
14 17 
        )
15 18 
 Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Browse code

mv pillar

xiangpin authored on 07/03/2022 06:19:21
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DESCRIPTION
History View file @ 3ee701f2
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@@ -34,8 +34,7 @@ Imports:
34 34 
     tidytree (>= 0.3.9),
35 35 
     treeio (>= 1.8.0),
36 36 
     utils,
37 
-    scales,
38 
-    pillar
37 
+    scales
39 38 
 Suggests:
40 39 
     emojifont,
41 40 
     ggimage,
Browse code

new tidytree version

xiangpin authored on 07/03/2022 02:57:03
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DESCRIPTION
History View file @ 69143d0b
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@@ -31,7 +31,7 @@ Imports:
31 31 
     ggfun,
32 32 
     yulab.utils,
33 33 
     tidyr,
34 
-    tidytree (>= 0.2.6),
34 
+    tidytree (>= 0.3.9),
35 35 
     treeio (>= 1.8.0),
36 36 
     utils,
37 37 
     scales,
Browse code

update citation

xiangpin authored on 01/03/2022 07:37:15
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DESCRIPTION
History View file @ f1d8298d
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@@ -34,7 +34,8 @@ Imports:
34 34 
     tidytree (>= 0.2.6),
35 35 
     treeio (>= 1.8.0),
36 36 
     utils,
37 
-    scales
37 
+    scales,
38 
+    pillar
38 39 
 Suggests:
39 40 
     emojifont,
40 41 
     ggimage,
Browse code

bump version

Guangchuang Yu authored on 10/12/2021 09:53:25
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DESCRIPTION
History View file @ b448e588
... ... 
@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.3.0.901
4 
+Version: 3.3.1
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

add message of graph layout

xiangpin authored on 10/12/2021 05:41:02
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DESCRIPTION
History View file @ a055e962
... ... 
@@ -45,7 +45,8 @@ Suggests:
45 45 
     rmarkdown,
46 46 
     stats,
47 47 
     testthat,
48 
-    tibble
48 
+    tibble,
49 
+    glue
49 50 
 Remotes:
50 51 
     GuangchuangYu/treeio
51 52 
 VignetteBuilder: knitr
Browse code

scale_color_subtree

Guangchuang Yu authored on 01/12/2021 08:14:20
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DESCRIPTION
History View file @ e005bd2c
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.3.0.900
4 
+Version: 3.3.0.901
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
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set na.value="white" in msaplot()

Guangchuang Yu authored on 29/10/2021 08:09:56
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DESCRIPTION
History View file @ 61a52643
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.3.0
4 
+Version: 3.3.0.900
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_14 branch

Nitesh Turaga authored on 26/10/2021 16:18:34
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DESCRIPTION
History View file @ 5784ab3b
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.2.0
4 
+Version: 3.3.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_14 branch

Nitesh Turaga authored on 26/10/2021 16:18:34
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DESCRIPTION
History View file @ b8b6fb8d
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.6
4 
+Version: 3.2.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

add paper url

Guangchuang Yu authored on 21/10/2021 09:56:36
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DESCRIPTION
History View file @ ca5e0d6f
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@@ -52,7 +52,7 @@ VignetteBuilder: knitr
52 52 
 ByteCompile: true
53 53 
 Encoding: UTF-8
54 54 
 License: Artistic-2.0
55 
-URL: https://yulab-smu.top/treedata-book/
55 
+URL: https://yulab-smu.top/treedata-book/ (book), http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12628 (paper)
56 56 
 BugReports: https://github.com/YuLab-SMU/ggtree/issues
57 57 
 Packaged: 2014-12-03 08:16:14 UTC; root
58 58 
 biocViews: Alignment, Annotation, Clustering, DataImport,
Browse code

bump version

Guangchuang Yu authored on 20/10/2021 03:09:01
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DESCRIPTION
History View file @ 40f8e5b3
... ... 
@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.5.902
4 
+Version: 3.1.6
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update news

Guangchuang Yu authored on 14/10/2021 01:59:58
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DESCRIPTION
History View file @ 0285e506
... ... 
@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.5.901
4 
+Version: 3.1.5.902
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

Merge remote-tracking branch 'upstream/master'

xiangpin authored on 13/10/2021 11:00:26
Showing 0 changed files
Browse code

extend of geom_cladelab supports two element vector

xiangpin authored on 13/10/2021 11:00:11
Showing 1 changed files
DESCRIPTION
History View file @ 7c32e8f8
... ... 
@@ -57,5 +57,5 @@ BugReports: https://github.com/YuLab-SMU/ggtree/issues
57 57 
 Packaged: 2014-12-03 08:16:14 UTC; root
58 58 
 biocViews: Alignment, Annotation, Clustering, DataImport,
59 59 
     MultipleSequenceAlignment, Phylogenetics, ReproducibleResearch, Software, Visualization
60 
-RoxygenNote: 7.1.1
60 
+RoxygenNote: 7.1.2
61 61 
 Roxygen: list(markdown = TRUE)
Browse code

update docs

Guangchuang Yu authored on 12/10/2021 08:54:53
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DESCRIPTION
History View file @ 9d807a64
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.5.900
4 
+Version: 3.1.5.901
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 29/09/2021 07:39:23
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DESCRIPTION
History View file @ 4be7f96d
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.5
4 
+Version: 3.1.5.900
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump version

Guangchuang Yu authored on 28/09/2021 02:28:22
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DESCRIPTION
History View file @ 017cce61
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.4.993
4 
+Version: 3.1.5
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 27/09/2021 01:45:34
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DESCRIPTION
History View file @ 1b50cd1c
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.4.992
4 
+Version: 3.1.4.993
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

fixed R check

Guangchuang Yu authored on 15/09/2021 02:29:08
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DESCRIPTION
History View file @ 5d2d10d4
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.4.991
4 
+Version: 3.1.4.992
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 03/09/2021 08:47:25
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DESCRIPTION
History View file @ efea7e42
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.4
4 
+Version: 3.1.4.991
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump version

Guangchuang Yu authored on 30/08/2021 07:41:48
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DESCRIPTION
History View file @ 8ffce60d
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.3.993
4 
+Version: 3.1.4
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 22/08/2021 03:57:17
Showing 1 changed files
DESCRIPTION
History View file @ 6e3cb68e
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.3.992
4 
+Version: 3.1.3.993
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 20/08/2021 07:12:33
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DESCRIPTION
History View file @ d95ec396
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.3.991
4 
+Version: 3.1.3.992
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

remove rvcheck depend

xiangpin authored on 18/08/2021 06:27:37
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DESCRIPTION
History View file @ 99b0a413
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@@ -28,7 +28,8 @@ Imports:
28 28 
     methods,
29 29 
     purrr,
30 30 
     rlang,
31 
-    rvcheck,
31 
+    ggfun,
32 
+    yulab.utils,
32 33 
     tidyr,
33 34 
     tidytree (>= 0.2.6),
34 35 
     treeio (>= 1.8.0),
Browse code

update docs

Guangchuang Yu authored on 14/08/2021 09:09:12
Showing 1 changed files
DESCRIPTION
History View file @ ede41366
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.3
4 
+Version: 3.1.3.991
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump up version

Guangchuang Yu authored on 10/08/2021 08:59:12
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DESCRIPTION
History View file @ e8acbda5
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.2.992
4 
+Version: 3.1.3
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 28/07/2021 07:35:07
Showing 1 changed files
DESCRIPTION
History View file @ 6e9e7e27
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.2.991
4 
+Version: 3.1.2.992
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update news

Guangchuang Yu authored on 06/07/2021 13:15:54
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DESCRIPTION
History View file @ bfa4bba3
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.2
4 
+Version: 3.1.2.991
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump version up

Guangchuang Yu authored on 21/06/2021 02:21:27
Showing 1 changed files
DESCRIPTION
History View file @ 7b03d4c1
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.1.992
4 
+Version: 3.1.2
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 11/06/2021 09:02:22
Showing 1 changed files
DESCRIPTION
History View file @ b7a8e27a
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.1.991
4 
+Version: 3.1.1.992
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 04/06/2021 07:24:02
Showing 1 changed files
DESCRIPTION
History View file @ 765d04e9
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.1
4 
+Version: 3.1.1.991
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bug fixed

Guangchuang Yu authored on 01/06/2021 09:22:43
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DESCRIPTION
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1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.0.991
4 
+Version: 3.1.1
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
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update docs

Guangchuang Yu authored on 01/06/2021 02:25:38
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DESCRIPTION
History View file @ 40edbafd
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1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.1.0
4 
+Version: 3.1.0.991
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_13 branch

Nitesh Turaga authored on 19/05/2021 16:10:46
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DESCRIPTION
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1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 3.0.0
4 
+Version: 3.1.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_13 branch

Nitesh Turaga authored on 19/05/2021 16:10:46
Showing 1 changed files
DESCRIPTION
History View file @ 189e5193
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1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.99.0
4 
+Version: 3.0.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump version up

Guangchuang Yu authored on 11/05/2021 07:24:10
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DESCRIPTION
History View file @ 384cc42a
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1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.5.3
4 
+Version: 2.99.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump version

Guangchuang Yu authored on 10/05/2021 04:27:52
Showing 1 changed files
DESCRIPTION
History View file @ 7afb395e
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1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.5.2
4 
+Version: 2.5.3
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 07/04/2021 08:44:10
Showing 1 changed files
DESCRIPTION
History View file @ fa43832b
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.5.1.9002
4 
+Version: 2.5.2
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update news

Guangchuang Yu authored on 30/03/2021 04:10:17
Showing 1 changed files
DESCRIPTION
History View file @ 4f54091e
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.5.1.9001
4 
+Version: 2.5.1.9002
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 25/02/2021 01:54:42
Showing 1 changed files
DESCRIPTION
History View file @ 7d2d06a8
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.5.1
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+Version: 2.5.1.9001
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
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v2.5.1

Guangchuang Yu authored on 08/01/2021 07:39:52
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DESCRIPTION
History View file @ 0acf2bde
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.5.0.993
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+Version: 2.5.1
5 5 
 Authors@R: c(
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        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update news

Guangchuang Yu authored on 23/12/2020 01:12:44
Showing 1 changed files
DESCRIPTION
History View file @ 78b0528a
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.5.0.992
4 
+Version: 2.5.0.993
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

update docs

Guangchuang Yu authored on 26/11/2020 06:52:14
Showing 1 changed files
DESCRIPTION
History View file @ 38d87f82
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.5.0.991
4 
+Version: 2.5.0.992
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump version

Guangchuang Yu authored on 29/10/2020 00:40:31
Showing 1 changed files
DESCRIPTION
History View file @ 523d4945
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.5.0
4 
+Version: 2.5.0.991
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_12 branch

Nitesh Turaga authored on 27/10/2020 15:02:08
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DESCRIPTION
History View file @ f51310a0
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.4.0
4 
+Version: 2.5.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_12 branch

Nitesh Turaga authored on 27/10/2020 15:02:08
Showing 1 changed files
DESCRIPTION
History View file @ 426aef4d
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.3.7
4 
+Version: 2.4.0
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump up version

Guangchuang Yu authored on 10/10/2020 08:11:20
Showing 1 changed files
DESCRIPTION
History View file @ 7d580884
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.3.6.991
4 
+Version: 2.3.7
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

label_pad

Guangchuang Yu authored on 09/10/2020 15:27:38
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DESCRIPTION
History View file @ 12f3dc39
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.3.6
4 
+Version: 2.3.6.991
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

bump version up

Guangchuang Yu authored on 09/10/2020 03:09:26
Showing 1 changed files
DESCRIPTION
History View file @ 8d8ea39a
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.3.5.993
4 
+Version: 2.3.6
5 5 
 Authors@R: c(
6 6 
        person("Guangchuang", "Yu",     email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-6485-8781")),
7 7 
        person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com",   role = c("aut", "ths")),
Browse code

fortify method for treedataList

Guangchuang Yu authored on 20/09/2020 06:49:31
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DESCRIPTION
History View file @ 6ae936b0
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@@ -1,7 +1,7 @@
1 1 
 Package: ggtree
2 2 
 Type: Package
3 3 
 Title: an R package for visualization of tree and annotation data
4 
-Version: 2.3.5.992