1. ggtree
  2. appveyor.yml
Browse code

site

guangchuang yu authored on 11/10/2016 02:07:36
Showing 1 changed files
appveyor.yml
History View file @ 2dba0a4
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+environment:
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+  matrix:
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+    - R_VERSION: devel
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+      R_ARCH: x64
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+      USE_RTOOLS: true
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+  _R_CHECK_FORCE_SUGGESTS_: false
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+
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+# DO NOT CHANGE the "init" and "install" sections below
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+
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+# Download script file from GitHub
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+init:
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+  ps: |
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+        $ErrorActionPreference = "Stop"
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+        Invoke-WebRequest http://raw.github.com/krlmlr/r-appveyor/master/scripts/appveyor-tool.ps1 -OutFile "..\appveyor-tool.ps1"
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+        Import-Module '..\appveyor-tool.ps1'
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+
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+install:
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+  ps: Bootstrap
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+
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+# Adapt as necessary starting from here
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+
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+build_script:
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+  - travis-tool.sh install_bioc BiocStyle Biostrings
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+  - travis-tool.sh install_deps
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+
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+test_script:
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+  - travis-tool.sh run_tests
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+
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+on_failure:
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+  - 7z a failure.zip *.Rcheck\*
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+  - appveyor PushArtifact failure.zip
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+
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+artifacts:
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+  - path: '*.Rcheck\**\*.log'
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+    name: Logs
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+
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+  - path: '*.Rcheck\**\*.out'
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+    name: Logs
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+
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+  - path: '*.Rcheck\**\*.fail'
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+    name: Logs
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+
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+  - path: '*.Rcheck\**\*.Rout'
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+    name: Logs
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+
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+  - path: '\*_*.tar.gz'
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+    name: Linux Package
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+
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+  - path: '\*_*.zip'
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+    name: Windows Package
Browse code

remove site

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@122175 bc3139a8-67e5-0310-9ffc-ced21a209358

g.yu authored on 11/10/2016 02:01:09
Showing 1 changed files
appveyor.yml
History View file @ a3253ad
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deleted file mode 100644
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-environment:
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-  matrix:
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-    - R_VERSION: devel
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-      R_ARCH: x64
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-      USE_RTOOLS: true
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-  _R_CHECK_FORCE_SUGGESTS_: false
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-
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-# DO NOT CHANGE the "init" and "install" sections below
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-
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-# Download script file from GitHub
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-init:
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-  ps: |
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-        $ErrorActionPreference = "Stop"
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-        Invoke-WebRequest http://raw.github.com/krlmlr/r-appveyor/master/scripts/appveyor-tool.ps1 -OutFile "..\appveyor-tool.ps1"
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-        Import-Module '..\appveyor-tool.ps1'
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-
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-install:
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-  ps: Bootstrap
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-
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-# Adapt as necessary starting from here
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-
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-build_script:
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-  - travis-tool.sh install_bioc BiocStyle Biostrings
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-  - travis-tool.sh install_deps
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-
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-test_script:
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-  - travis-tool.sh run_tests
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-
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-on_failure:
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-  - 7z a failure.zip *.Rcheck\*
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-  - appveyor PushArtifact failure.zip
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-
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-artifacts:
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-  - path: '*.Rcheck\**\*.log'
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-    name: Logs
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-
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-  - path: '*.Rcheck\**\*.out'
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-    name: Logs
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-
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-  - path: '*.Rcheck\**\*.fail'
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-    name: Logs
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-
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-  - path: '*.Rcheck\**\*.Rout'
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-    name: Logs
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-
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-  - path: '\*_*.tar.gz'
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-    name: Linux Package
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-
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-  - path: '\*_*.zip'
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-    name: Windows Package
Browse code

configure appveyor

GuangchuangYu authored on 06/09/2016 04:15:09
Showing 1 changed files
appveyor.yml
History View file @ 882708f
... ... 
@@ -1,3 +1,10 @@
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+environment:
2 
+  matrix:
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+    - R_VERSION: devel
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+      R_ARCH: x64
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+      USE_RTOOLS: true
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+  _R_CHECK_FORCE_SUGGESTS_: false
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+
1 8 
 # DO NOT CHANGE the "init" and "install" sections below
2 9
3 10 
 # Download script file from GitHub
Browse code

appveyor

GuangchuangYu authored on 09/08/2016 12:03:25
Showing 1 changed files
appveyor.yml
History View file @ de77db0
... ... 
@@ -13,8 +13,7 @@ install:
13 13 
 # Adapt as necessary starting from here
14 14
15 15 
 build_script:
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-  - travis-tool.sh install_r base64
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-   - travis-tool.sh install_bioc BiocInstaller BiocStyle Biostrings
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+  - travis-tool.sh install_bioc BiocStyle Biostrings
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   - travis-tool.sh install_deps
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20 19 
 test_script:
... ... 
@@ -38,7 +37,7 @@ artifacts:
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     name: Logs
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   - path: '\*_*.tar.gz'
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-    name: Bits
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+    name: Linux Package
42 41
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   - path: '\*_*.zip'
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-    name: Bits
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+    name: Windows Package
Browse code

appveyor

GuangchuangYu authored on 09/08/2016 11:55:15
Showing 1 changed files
appveyor.yml
History View file @ bd1d5de
... ... 
@@ -14,7 +14,7 @@ install:
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15 15 
 build_script:
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   - travis-tool.sh install_r base64
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-   - travis-tool.sh install_bioc BiocStyle Biostrings
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+   - travis-tool.sh install_bioc BiocInstaller BiocStyle Biostrings
18 18 
   - travis-tool.sh install_deps
19 19
20 20 
 test_script:
Browse code

appveyor

GuangchuangYu authored on 09/08/2016 11:50:53
Showing 1 changed files
appveyor.yml
History View file @ 58aa975
... ... 
@@ -1,30 +1,44 @@
1 
-environment:
2 
-  R_CHECK_ARGS: --no-manual
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-  _R_CHECK_FORCE_SUGGESTS_: false
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-
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+# DO NOT CHANGE the "init" and "install" sections below
2 
+
3 
+# Download script file from GitHub
5 4 
 init:
6 5 
   ps: |
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         $ErrorActionPreference = "Stop"
8 7 
         Invoke-WebRequest http://raw.github.com/krlmlr/r-appveyor/master/scripts/appveyor-tool.ps1 -OutFile "..\appveyor-tool.ps1"
9 8 
         Import-Module '..\appveyor-tool.ps1'
10 9
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-
12 10 
 install:
13 11 
   ps: Bootstrap
14 12
13 
+# Adapt as necessary starting from here
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+
15 15 
 build_script:
16 16 
   - travis-tool.sh install_r base64
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-  - travis-tool.sh install_bioc BiocStyle Biostrings
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-##  - travis-tool.sh install_bioc_deps
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-
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+   - travis-tool.sh install_bioc BiocStyle Biostrings
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+  - travis-tool.sh install_deps
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+
20 20 
 test_script:
21 21 
   - travis-tool.sh run_tests
22 22
23 23 
 on_failure:
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-  - travis-tool.sh dump_logs
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+  - 7z a failure.zip *.Rcheck\*
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+  - appveyor PushArtifact failure.zip
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+
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+artifacts:
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+  - path: '*.Rcheck\**\*.log'
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+    name: Logs
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+
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+  - path: '*.Rcheck\**\*.out'
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+    name: Logs
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+
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+  - path: '*.Rcheck\**\*.fail'
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+    name: Logs
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+
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+  - path: '*.Rcheck\**\*.Rout'
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+    name: Logs
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-## notifications:
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-##   email:
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-##     on_success: change
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-##     on_failure: change
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+  - path: '\*_*.tar.gz'
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+    name: Bits
30 42
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+  - path: '\*_*.zip'
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+    name: Bits
Browse code

test appveyor

GuangchuangYu authored on 09/08/2016 11:47:10
Showing 1 changed files
appveyor.yml
History View file @ ac221b3
... ... 
@@ -1,6 +1,7 @@
1 1 
 environment:
2 2 
   R_CHECK_ARGS: --no-manual
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-
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+  _R_CHECK_FORCE_SUGGESTS_: false
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+
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 init:
5 6 
   ps: |
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         $ErrorActionPreference = "Stop"
... ... 
@@ -12,8 +13,8 @@ install:
12 13 
   ps: Bootstrap
13 14
14 15 
 build_script:
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-  - travis-tool.sh install_deps
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-  - travis-tool.sh install_bioc BiocStyle Biostrings EBImage
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+  - travis-tool.sh install_r base64
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+  - travis-tool.sh install_bioc BiocStyle Biostrings
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 ##  - travis-tool.sh install_bioc_deps
18 19
19 20 
 test_script:
... ... 
@@ -22,8 +23,8 @@ test_script:
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 on_failure:
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   - travis-tool.sh dump_logs
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-notifications:
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-  email:
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-    on_success: change
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-    on_failure: change
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+## notifications:
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+##   email:
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+##     on_success: change
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+##     on_failure: change
29 30
Browse code

update appveyor.yml

GuangchuangYu authored on 22/05/2015 08:46:42
Showing 1 changed files
appveyor.yml
History View file @ 6083e20
... ... 
@@ -13,9 +13,7 @@ install:
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14 14 
 build_script:
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   - travis-tool.sh install_deps
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-  - travis-tool.sh install_bioc EBImage
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-  - travis-tool.sh install_bioc BiocStyle
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-  - travis-tool.sh install_bioc Biostrings
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+  - travis-tool.sh install_bioc BiocStyle Biostrings EBImage
19 17 
 ##  - travis-tool.sh install_bioc_deps
20 18
21 19 
 test_script:
Browse code

appveyor

GuangchuangYu authored on 22/05/2015 05:56:09
Showing 1 changed files
appveyor.yml
History View file @ 2211e2a
... ... 
@@ -7,20 +7,17 @@ init:
7 7 
         Invoke-WebRequest http://raw.github.com/krlmlr/r-appveyor/master/scripts/appveyor-tool.ps1 -OutFile "..\appveyor-tool.ps1"
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         Import-Module '..\appveyor-tool.ps1'
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-
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-apt_packages:
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-  - libfftw3-dev
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-
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-# before_install:
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-#   - sudo apt-get install libfftw3-dev
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17 11 
 install:
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   ps: Bootstrap
19 13
20 14 
 build_script:
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-  - travis-tool.sh install_bioc_deps
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   - travis-tool.sh install_deps
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-
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+  - travis-tool.sh install_bioc EBImage
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+  - travis-tool.sh install_bioc BiocStyle
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+  - travis-tool.sh install_bioc Biostrings
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+##  - travis-tool.sh install_bioc_deps
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+
24 21 
 test_script:
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   - travis-tool.sh run_tests
26 23
Browse code

appveyor

GuangchuangYu authored on 22/05/2015 05:50:35
Showing 1 changed files
appveyor.yml
History View file @ 077875e
... ... 
@@ -7,8 +7,12 @@ init:
7 7 
         Invoke-WebRequest http://raw.github.com/krlmlr/r-appveyor/master/scripts/appveyor-tool.ps1 -OutFile "..\appveyor-tool.ps1"
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         Import-Module '..\appveyor-tool.ps1'
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-before_install:
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-  - sudo apt-get install libfftw3-dev
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+
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+apt_packages:
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+  - libfftw3-dev
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+
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+# before_install:
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+#   - sudo apt-get install libfftw3-dev
12 16
13 17 
 install:
14 18 
   ps: Bootstrap
Browse code

appveyor

GuangchuangYu authored on 22/05/2015 05:47:11
Showing 1 changed files
appveyor.yml
History View file @ b71ca03
... ... 
@@ -7,6 +7,9 @@ init:
7 7 
         Invoke-WebRequest http://raw.github.com/krlmlr/r-appveyor/master/scripts/appveyor-tool.ps1 -OutFile "..\appveyor-tool.ps1"
8 8 
         Import-Module '..\appveyor-tool.ps1'
9 9
10 
+before_install:
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+  - sudo apt-get install libfftw3-dev
12 
+
10 13 
 install:
11 14 
   ps: Bootstrap
12 15
Browse code

appveyor

GuangchuangYu authored on 09/02/2015 10:08:09
Showing 1 changed files
appveyor.yml
History View file @ 0562522
1 1 
new file mode 100644
... ... 
@@ -0,0 +1,27 @@
1 
+environment:
2 
+  R_CHECK_ARGS: --no-manual
3 
+
4 
+init:
5 
+  ps: |
6 
+        $ErrorActionPreference = "Stop"
7 
+        Invoke-WebRequest http://raw.github.com/krlmlr/r-appveyor/master/scripts/appveyor-tool.ps1 -OutFile "..\appveyor-tool.ps1"
8 
+        Import-Module '..\appveyor-tool.ps1'
9 
+
10 
+install:
11 
+  ps: Bootstrap
12 
+
13 
+build_script:
14 
+  - travis-tool.sh install_bioc_deps
15 
+  - travis-tool.sh install_deps
16 
+
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+test_script:
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+  - travis-tool.sh run_tests
19 
+
20 
+on_failure:
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+  - travis-tool.sh dump_logs
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+
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+notifications:
24 
+  email:
25 
+    on_success: change
26 
+    on_failure: change
27 
+