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-% Generated by roxygen2: do not edit by hand |
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-% Please edit documentation in R/phangorn.R |
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-\name{pmlToSeq} |
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-\alias{pmlToSeq} |
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-\title{pmlToSeq} |
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-\usage{ |
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-pmlToSeq(pml, type = "ml", includeAncestor = TRUE) |
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-} |
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-\arguments{ |
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-\item{pml}{pml object} |
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- |
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-\item{type}{one of "marginal", "ml", "bayes"} |
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- |
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-\item{includeAncestor}{logical} |
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-} |
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-\value{ |
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-XStringSet |
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-} |
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-\description{ |
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-convert pml object to XStringSet object |
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-} |
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-\author{ |
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-ygc |
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-} |
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- |
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@@ -4,11 +4,13 @@ |
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\alias{pmlToSeq} |
5 | 5 |
\title{pmlToSeq} |
6 | 6 |
\usage{ |
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-pmlToSeq(pml, includeAncestor = TRUE) |
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+pmlToSeq(pml, type = "ml", includeAncestor = TRUE) |
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} |
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\arguments{ |
10 | 10 |
\item{pml}{pml object} |
11 | 11 |
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+\item{type}{one of "marginal", "ml", "bayes"} |
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+ |
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\item{includeAncestor}{logical} |
13 | 15 |
} |
14 | 16 |
\value{ |
git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@111815 bc3139a8-67e5-0310-9ffc-ced21a209358
1 | 1 |
new file mode 100644 |
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+% Generated by roxygen2: do not edit by hand |
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+% Please edit documentation in R/phangorn.R |
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+\name{pmlToSeq} |
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+\alias{pmlToSeq} |
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+\title{pmlToSeq} |
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+\usage{ |
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+pmlToSeq(pml, includeAncestor = TRUE) |
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+} |
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+\arguments{ |
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+\item{pml}{pml object} |
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+ |
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+\item{includeAncestor}{logical} |
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+} |
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+\value{ |
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+XStringSet |
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+} |
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+\description{ |
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+convert pml object to XStringSet object |
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+} |
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+\author{ |
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+ygc |
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+} |
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+ |