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Merge pull request #197 from vmikk/vmik_fix

Fix examples with `sample.nwk`

Guangchuang Yu authored on 27/09/2018 07:12:22 • GitHub committed on 27/09/2018 07:12:22
Showing 2 changed files

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@@ -156,7 +156,7 @@ scale_x_ggtree <- function(tree_view, breaks=NULL, labels=NULL) {
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 ## ##' @export
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 ## ##' @author Guangchuang Yu \url{http://ygc.name}
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 ## ##' @examples
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-## ##' nwk <- system.file("extdata", "sample.nwk", package="ggtree")
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+## ##' nwk <- system.file("extdata", "sample.nwk", package="treeio")
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 ## ##' tree <- read.tree(nwk)
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 ## ##' p <- ggtree(tree)
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 ## ##' d <- matrix(abs(rnorm(52)), ncol=4)
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@@ -10,7 +10,7 @@
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 ##' @author Yu Guangchuang
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 ##' @examples
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 ##' library("ggplot2")
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-##' nwk <- system.file("extdata", "sample.nwk", package="ggtree")
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+##' nwk <- system.file("extdata", "sample.nwk", package="treeio")
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 ##' tree <- read.tree(nwk)
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 ##' p <- ggtree(tree) + geom_tippoint(color="#b5e521", alpha=1/4, size=10)
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 ##' p %<% rtree(30)
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@@ -32,7 +32,7 @@
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 ##' @export
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 ##' @author Yu Guangchuang
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 ##' @examples
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-##' nwk <- system.file("extdata", "sample.nwk", package="ggtree")
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+##' nwk <- system.file("extdata", "sample.nwk", package="treeio")
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 ##' tree <- read.tree(nwk)
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 ##' p <- ggtree(tree)
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 ##' dd <- data.frame(taxa=LETTERS[1:13],