@@ -52,4 +52,4 @@ BugReports: https://github.com/GuangchuangYu/ggtree/issues

 Packaged: 2014-12-03 08:16:14 UTC; root

 biocViews: Alignment, Annotation, Clustering, DataImport,

     MultipleSequenceAlignment, ReproducibleResearch, Software, Visualization

-RoxygenNote: 6.1.0

+RoxygenNote: 6.1.1

@@ -31,7 +31,7 @@ install:

 check: rd build

 	cd ..;\

-	Rscript -e 'rcmdcheck::rcmdcheck("$(PKGNAME)_$(PKGVERS).tar.gz")'

+	Rscript -e "rcmdcheck::rcmdcheck('$(PKGNAME)_$(PKGVERS).tar.gz')"

 check2: rd build

 	cd ..;\

@@ -43,7 +43,7 @@ check3: rd build2

 bioccheck:

 	cd ..;\

-	Rscript -e 'BiocCheck::BiocCheck("$(PKGNAME)_$(PKGVERS).tar.gz")'

+	Rscript -e "BiocCheck::BiocCheck('$(PKGNAME)_$(PKGVERS).tar.gz')"

 clean:

 	cd ..;\

@@ -5,11 +5,11 @@

                   "For help: https://guangchuangyu.github.io/software/", pkgname, "\n\n")

     citation <- paste0("If you use ", pkgname, " in published research, please cite the most appropriate paper(s):\n\n",

-                       '\033[36m', '\u25C9', '\033[39m ',

+                       '\033[36m', '-', '\033[39m ',

                        "Guangchuang Yu, David Smith, Huachen Zhu, Yi Guan, Tommy Tsan-Yuk Lam. ",

                        "ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data. ",

                        "Methods in Ecology and Evolution 2017, 8(1):28-36, doi:10.1111/2041-210X.12628\n\n",

-                       '\033[36m', '\u25C9', '\033[39m ',

+                       '\033[36m', '-', '\033[39m ',

                        "Guangchuang Yu, Tommy Tsan-Yuk Lam, Huachen Zhu, Yi Guan. ",

                        "Two methods for mapping and visualizing associated data on phylogeny using ggtree. ",

                        "Molecular Biology and Evolution 2018, accepted. doi: 10.1093/molbev/msy194"

@@ -4,11 +4,14 @@

 \name{reroot}

 \alias{reroot}

 \alias{reroot,phylo-method}

+\alias{reroot,treedata-method}

 \title{reroot method}

 \usage{

 reroot(object, node, ...)

 \S4method{reroot}{phylo}(object, node, ...)

+

+\S4method{reroot}{treedata}(object, node, ...)

 }

 \arguments{

 \item{object}{\code{treedata} object}