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update readme

Guangchuang Yu authored on 10/01/2019 13:23:53
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@@ -70,7 +70,8 @@ visualization and annotation of phylogenetic trees with their covariates and
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 other associated data. __*Methods in Ecology and Evolution*__. 2017, 8(1):28-36.
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 doi: [10.1111/2041-210X.12628](https://doi.org/10.1111/2041-210X.12628).
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 2. __G Yu__^\*^, TTY Lam, H Zhu, Y Guan^\*^. Two methods for mapping and visualizing associated data on phylogeny using ggtree. __*Molecular Biology and Evolution*__, 2018, 35(2):3041-3043.
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-doi: [10.1093/molbev/msy194](https://doi.org/10.1093/molbev/msy194). [Source code to produce Supplementary Material](https://github.com/GuangchuangYu/plotting_tree_with_data).
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+doi: [10.1093/molbev/msy194](https://doi.org/10.1093/molbev/msy194).
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+     - [Source code to produce Supplementary Material](https://github.com/GuangchuangYu/plotting_tree_with_data)
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@@ -5,7 +5,7 @@
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 <img src="https://raw.githubusercontent.com/Bioconductor/BiocStickers/master/ggtree/ggtree.png" height="200" align="right" />
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 [![](https://img.shields.io/badge/release%20version-1.14.4-green.svg)](https://www.bioconductor.org/packages/ggtree)
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-[![](https://img.shields.io/badge/devel%20version-1.15.3-green.svg)](https://github.com/guangchuangyu/ggtree)
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+[![](https://img.shields.io/badge/devel%20version-1.15.4-green.svg)](https://github.com/guangchuangyu/ggtree)
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 [![Bioc](http://www.bioconductor.org/shields/years-in-bioc/ggtree.svg)](https://www.bioconductor.org/packages/devel/bioc/html/ggtree.html#since)
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 [![Awesome](https://cdn.rawgit.com/sindresorhus/awesome/d7305f38d29fed78fa85652e3a63e154dd8e8829/media/badge.svg)](https://awesome-r.com/#awesome-r-graphic-displays)
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@@ -14,7 +14,7 @@
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 state and is being actively
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 developed.](http://www.repostatus.org/badges/latest/active.svg)](http://www.repostatus.org/#active)
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 [![codecov](https://codecov.io/gh/GuangchuangYu/ggtree/branch/master/graph/badge.svg)](https://codecov.io/gh/GuangchuangYu/ggtree)
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-[![Last-changedate](https://img.shields.io/badge/last%20change-2019--01--09-green.svg)](https://github.com/GuangchuangYu/ggtree/commits/master)
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+[![Last-changedate](https://img.shields.io/badge/last%20change-2019--01--10-green.svg)](https://github.com/GuangchuangYu/ggtree/commits/master)
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 The `ggtree` package extending the `ggplot2` package. It based on
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 grammar of graphics and takes all the good parts of `ggplot2`. `ggtree`
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@@ -58,8 +58,8 @@ list:
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     using ggtree. ***Molecular Biology and Evolution***, 2018,
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     35(2):3041-3043. doi:
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     [10.1093/molbev/msy194](https://doi.org/10.1093/molbev/msy194).
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-    [Source code to produce Supplementary
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-    Material](https://github.com/GuangchuangYu/plotting_tree_with_data).
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+      - [Source code to produce Supplementary
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+        Material](https://github.com/GuangchuangYu/plotting_tree_with_data)
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 <img src="https://guangchuangyu.github.io/software/ggtree/featured-articles/index_files/figure-html/citation-1.png" width="890"/>
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