1. ggtree
  2. Commit 975ee5231617e76ef48ef69d2ba6d304d9594ba0
Browse code

new logo using hexSticker

guangchuang yu authored on 13/03/2017 10:40:21
Showing 16 changed files
.Rbuildignore
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@@ -11,3 +11,4 @@ mkdocs
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 docs
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 logo.png.github
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 .github
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+ggtree_sticker.R
R/subview.R
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@@ -66,12 +66,14 @@ subview <- function(mainview, subview, x, y, width=.1, height=.1) {
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     xrng <- diff(xrng)
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     yrng <- diff(yrng)
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-    if (!any(class(subview) %in% c("ggplot", "grob", "character"))) {
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+    if (!any(class(subview) %in% c("ggplot", "trellis", "grob", "character"))) {
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         stop("subview should be a ggplot or grob object, or an image file...")
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     }
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     if (is(subview, "ggplot")) {
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         sv <- ggplotGrob(subview)
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+    } else if (is(subview, "trellis")) {
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+        sv <- grid::grid.grabExpr(print(subview))
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     } else if (is(subview, "grob")) {
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         sv <- subview
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     } else if (file.exists(subview)) {
README.Rmd
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@@ -15,7 +15,7 @@ library("txtplot")
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 library("ypages")
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 ```
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-<img src="https://raw.githubusercontent.com/jotsetung/BioC-stickers/master/ggtree/ggtree.png" height="128", align="right" />
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+<img src="https://guangchuangyu.github.io/ggtree/ggtree.png" height="128", align="right" />
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 `r badge_bioc_release("ggtree", "green")`
README.md
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@@ -2,9 +2,9 @@
2 2 
 ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
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 ===========================================================================================================================
4 4
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-<img src="https://raw.githubusercontent.com/jotsetung/BioC-stickers/master/ggtree/ggtree.png" height="128", align="right" />
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+<img src="https://guangchuangyu.github.io/ggtree/ggtree.png" height="128", align="right" />
6 6
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-[![](https://img.shields.io/badge/release%20version-1.6.10-green.svg?style=flat)](https://bioconductor.org/packages/ggtree) [![](https://img.shields.io/badge/devel%20version-1.7.9-green.svg?style=flat)](https://github.com/guangchuangyu/ggtree) [![Bioc](http://www.bioconductor.org/shields/years-in-bioc/ggtree.svg)](https://www.bioconductor.org/packages/devel/bioc/html/ggtree.html#since) [![](https://img.shields.io/badge/download-12746/total-blue.svg?style=flat)](https://bioconductor.org/packages/stats/bioc/ggtree) [![](https://img.shields.io/badge/download-967/month-blue.svg?style=flat)](https://bioconductor.org/packages/stats/bioc/ggtree)
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+[![](https://img.shields.io/badge/release%20version-1.6.10-green.svg?style=flat)](https://bioconductor.org/packages/ggtree) [![](https://img.shields.io/badge/devel%20version-1.7.10-green.svg?style=flat)](https://github.com/guangchuangyu/ggtree) [![Bioc](http://www.bioconductor.org/shields/years-in-bioc/ggtree.svg)](https://www.bioconductor.org/packages/devel/bioc/html/ggtree.html#since) [![](https://img.shields.io/badge/download-12746/total-blue.svg?style=flat)](https://bioconductor.org/packages/stats/bioc/ggtree) [![](https://img.shields.io/badge/download-967/month-blue.svg?style=flat)](https://bioconductor.org/packages/stats/bioc/ggtree)
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 [![Project Status: Active - The project has reached a stable, usable state and is being actively developed.](http://www.repostatus.org/badges/latest/active.svg)](http://www.repostatus.org/#active) [![codecov](https://codecov.io/gh/GuangchuangYu/ggtree/branch/master/graph/badge.svg)](https://codecov.io/gh/GuangchuangYu/ggtree) [![Last-changedate](https://img.shields.io/badge/last%20change-2017--03--13-green.svg)](https://github.com/GuangchuangYu/ggtree/commits/master) [![GitHub forks](https://img.shields.io/github/forks/GuangchuangYu/ggtree.svg)](https://github.com/GuangchuangYu/ggtree/network) [![GitHub stars](https://img.shields.io/github/stars/GuangchuangYu/ggtree.svg)](https://github.com/GuangchuangYu/ggtree/stargazers) [![Awesome](https://cdn.rawgit.com/sindresorhus/awesome/d7305f38d29fed78fa85652e3a63e154dd8e8829/media/badge.svg)](https://awesome-r.com/#awesome-r-graphic-displays)
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docs/featuredArticles/index.html
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@@ -220,7 +220,7 @@
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 <p><link rel="stylesheet" href="https://guangchuangyu.github.io/css/font-awesome.min.css"></p>
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 <p><a href="https://github.com/GuangchuangYu/featured_img">Let us know</a> if you have
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 published using <code>ggtree</code> and your publication will be featured here.</p>
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-<p><a href="https://scholar.google.com.hk/scholar?oi=bibs&amp;hl=en&amp;cites=7268358477862164627"><img alt="citation" src="https://img.shields.io/badge/cited%20by-8-blue.svg?style=flat" /></a>
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+<p><a href="https://scholar.google.com.hk/scholar?oi=bibs&amp;hl=en&amp;cites=7268358477862164627"><img alt="citation" src="https://img.shields.io/badge/cited%20by-9-blue.svg?style=flat" /></a>
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 <link rel='stylesheet' href=https://guangchuangyu.github.io/resume/css/morris.css>
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 <script src='https://guangchuangyu.github.io/resume/css/jquery.min.js' type='text/javascript'></script>
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 <script src='https://guangchuangyu.github.io/resume/css/raphael-min.js' type='text/javascript'></script>
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@@ -234,12 +234,12 @@ published using <code>ggtree</code> and your publication will be featured here.<
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     height: 300px;
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   }<br />
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   </style>
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-<div id="chart8dfef1a8f3b" class="rChart morris"></p>
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+<div id="chart576124eca87f" class="rChart morris"></p>
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 </div>
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 <script type='text/javascript'>
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     var chartParams = {
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- "element": "chart8dfef1a8f3b",
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+ "element": "chart576124eca87f",
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 "width":            800,
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 "height":            400,
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 "xkey": "year",
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@@ -254,11 +254,11 @@ published using <code>ggtree</code> and your publication will be featured here.<
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 },
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 {
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  "year": 2017,
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-"cites":              7,
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+"cites":              8,
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 "pubid": "HtEfBTGE9r8C"
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 }
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 ],
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-"id": "chart8dfef1a8f3b",
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+"id": "chart576124eca87f",
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 "labels": "cites"
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 },
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       chartType = "Bar"
docs/gallery/index.html
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@@ -218,7 +218,7 @@
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 <!-- AddToAny END -->
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 <p><link rel="stylesheet" href="https://guangchuangyu.github.io/css/font-awesome.min.css"></p>
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-<p><a href="https://scholar.google.com.hk/scholar?oi=bibs&amp;hl=en&amp;cites=7268358477862164627"><img alt="citation" src="https://img.shields.io/badge/cited%20by-8-blue.svg?style=flat" /></a></p>
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+<p><a href="https://scholar.google.com.hk/scholar?oi=bibs&amp;hl=en&amp;cites=7268358477862164627"><img alt="citation" src="https://img.shields.io/badge/cited%20by-9-blue.svg?style=flat" /></a></p>
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 <!-- citation:=HtEfBTGE9r8C:=7268358477862164627 -->
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 <h2 id="journal-articles"><i class="fa fa-mortar-board"></i> Journal Articles</h2>
docs/ggtree.png
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docs/index.html
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@@ -229,13 +229,13 @@
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 <!-- AddToAny END -->
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-<p><img src="https://raw.githubusercontent.com/jotsetung/BioC-stickers/master/ggtree/ggtree.png" height="128", align="right" /></p>
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+<p><img src="https://guangchuangyu.github.io/ggtree/ggtree.png" height="128", align="right" /></p>
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 <p><link rel="stylesheet" href="https://guangchuangyu.github.io/css/font-awesome.min.css">
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 <link rel="stylesheet" href="https://guangchuangyu.github.io/css/academicons.min.css"></p>
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-<p><a href="https://bioconductor.org/packages/ggtree"><img alt="releaseVersion" src="https://img.shields.io/badge/release%20version-1.6.10-blue.svg?style=flat" /></a>
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-<a href="https://github.com/guangchuangyu/ggtree"><img alt="develVersion" src="https://img.shields.io/badge/devel%20version-1.7.9-blue.svg?style=flat" /></a>
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-<a href="https://bioconductor.org/packages/stats/bioc/ggtree"><img alt="total" src="https://img.shields.io/badge/downloads-12364/total-blue.svg?style=flat" /></a>
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-<a href="https://bioconductor.org/packages/stats/bioc/ggtree"><img alt="month" src="https://img.shields.io/badge/downloads-932/month-blue.svg?style=flat" /></a></p>
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+<p><a href="https://bioconductor.org/packages/ggtree"><img alt="" src="https://img.shields.io/badge/release%20version-1.6.10-blue.svg?style=flat" /></a>
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+<a href="https://github.com/guangchuangyu/ggtree"><img alt="" src="https://img.shields.io/badge/devel%20version-1.7.10-blue.svg?style=flat" /></a>
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+<a href="https://bioconductor.org/packages/stats/bioc/ggtree"><img alt="" src="https://img.shields.io/badge/download-12746/total-blue.svg?style=flat" /></a>
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+<a href="https://bioconductor.org/packages/stats/bioc/ggtree"><img alt="" src="https://img.shields.io/badge/download-967/month-blue.svg?style=flat" /></a></p>
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 <p>The <code>ggtree</code> package extending the <em>ggplot2</em> package. It based on
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 grammar of graphics and takes all the good parts of <em>ggplot2</em>. <em>ggtree</em>
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 is designed for not only viewing phylogenetic tree but also displaying
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@@ -255,9 +255,9 @@ University of Hong Kong.</p>
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 <a href="https://impactstory.org/u/0000-0002-6485-8781"><i class="ai ai-impactstory ai-3x"></i></a></p>
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 <h2 id="citation"><i class="fa fa-book"></i> Citation</h2>
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 <p>Please cite the following article when using <code>ggtree</code>:</p>
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-<p><a href="http://dx.doi.org/10.1111/2041-210X.12628"><img alt="doi" src="https://img.shields.io/badge/doi-10.1111/2041--210X.12628-blue.svg?style=flat" /></a>
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-<a href="https://scholar.google.com.hk/scholar?oi=bibs&amp;hl=en&amp;cites=7268358477862164627"><img alt="citation" src="https://img.shields.io/badge/cited%20by-8-blue.svg?style=flat" /></a>
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-<a href="https://www.altmetric.com/details/10533079"><img alt="Altmetric" src="https://img.shields.io/badge/Altmetric-352-blue.svg?style=flat" /></a></p>
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+<p><a href="http://dx.doi.org/10.1111/2041-210X.12628"><img alt="" src="https://img.shields.io/badge/doi-10.1111/2041--210X.12628-blue.svg?style=flat" /></a>
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+<a href="https://scholar.google.com.hk/scholar?oi=bibs&amp;hl=en&amp;cites=7268358477862164627"><img alt="citation" src="https://img.shields.io/badge/cited%20by-9-blue.svg?style=flat" /></a>
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+<a href="https://www.altmetric.com/details/10533079"><img alt="" src="https://img.shields.io/badge/Altmetric-351-blue.svg?style=flat" /></a></p>
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 <p><strong>G Yu</strong>, DK Smith, H Zhu, Y Guan, TTY Lam<sup>*</sup>. ggtree: an R
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 package for visualization and annotation of phylogenetic trees with
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 their covariates and other associated data. <strong><em>Methods in Ecology and
docs/mkdocs/search_index.json
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@@ -217,7 +217,7 @@
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         },
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         {
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             "location": "/featuredArticles/",
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-            "text": "Let us know\n if you have\npublished using \nggtree\n and your publication will be featured here.\n\n\n\n\n\n\n\n\n\n\n\n\n\n  .rChart {\n    display: block;\n    margin-left: auto; \n    margin-right: auto;\n    width: 800px;\n    height: 300px;\n  }<br />\n  \n\n\n\n\n\n\n\n\n    var chartParams = {\n \"element\": \"chart8dfef1a8f3b\",\n\"width\":            800,\n\"height\":            400,\n\"xkey\": \"year\",\n\"ykeys\": [\n \"cites\" \n],\n\"data\": [\n {\n \"year\": 2016,\n\"cites\":              1,\n\"pubid\": \"HtEfBTGE9r8C\" \n},\n{\n \"year\": 2017,\n\"cites\":              7,\n\"pubid\": \"HtEfBTGE9r8C\" \n} \n],\n\"id\": \"chart8dfef1a8f3b\",\n\"labels\": \"cites\" \n},\n      chartType = \"Bar\"\n    new Morris[chartType](chartParams)\n\n\n\n\n\n\n\n\n\n\n 2017\n\n\nPhylogenetic analysis of the human antibody repertoire reveals\nquantitative signatures of immune senescence and\naging\n. \nPNAS\n, 2017\n\n\nGut metagenomes of type 2 diabetic patients have characteristic\nsingle-nucleotide polymorphism distribution in \nBacteroides\ncoprocola\n.\n\nMicrobiome\n, 2017, 5:15\n\n\n 2016\n\n\nFunction and Phylogeny of Bacterial Butyryl Coenzyme A:Acetate\nTransferases and Their Diversity in the Proximal Colon of\nSwine\n. \nApplied and\nEnvironmental Microbiology\n. 2016,82(22):6788-6798.",
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+            "text": "Let us know\n if you have\npublished using \nggtree\n and your publication will be featured here.\n\n\n\n\n\n\n\n\n\n\n\n\n\n  .rChart {\n    display: block;\n    margin-left: auto; \n    margin-right: auto;\n    width: 800px;\n    height: 300px;\n  }<br />\n  \n\n\n\n\n\n\n\n\n    var chartParams = {\n \"element\": \"chart576124eca87f\",\n\"width\":            800,\n\"height\":            400,\n\"xkey\": \"year\",\n\"ykeys\": [\n \"cites\" \n],\n\"data\": [\n {\n \"year\": 2016,\n\"cites\":              1,\n\"pubid\": \"HtEfBTGE9r8C\" \n},\n{\n \"year\": 2017,\n\"cites\":              8,\n\"pubid\": \"HtEfBTGE9r8C\" \n} \n],\n\"id\": \"chart576124eca87f\",\n\"labels\": \"cites\" \n},\n      chartType = \"Bar\"\n    new Morris[chartType](chartParams)\n\n\n\n\n\n\n\n\n\n\n 2017\n\n\nPhylogenetic analysis of the human antibody repertoire reveals\nquantitative signatures of immune senescence and\naging\n. \nPNAS\n, 2017\n\n\nGut metagenomes of type 2 diabetic patients have characteristic\nsingle-nucleotide polymorphism distribution in \nBacteroides\ncoprocola\n.\n\nMicrobiome\n, 2017, 5:15\n\n\n 2016\n\n\nFunction and Phylogeny of Bacterial Butyryl Coenzyme A:Acetate\nTransferases and Their Diversity in the Proximal Colon of\nSwine\n. \nApplied and\nEnvironmental Microbiology\n. 2016,82(22):6788-6798.",
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             "title": "Featured Articles"
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         },
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         {
docs/sitemap.xml
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     <url>
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      <loc>https://guangchuangyu.github.io/ggtree/</loc>
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-     <lastmod>2017-03-08</lastmod>
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+     <lastmod>2017-03-13</lastmod>
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      <changefreq>daily</changefreq>
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     </url>
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     <url>
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      <loc>https://guangchuangyu.github.io/ggtree/documentation/</loc>
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-     <lastmod>2017-03-08</lastmod>
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      <changefreq>daily</changefreq>
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     </url>
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     <url>
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      <loc>https://guangchuangyu.github.io/ggtree/faq/</loc>
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-     <lastmod>2017-03-08</lastmod>
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      <changefreq>daily</changefreq>
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     </url>
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     <url>
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      <loc>https://guangchuangyu.github.io/ggtree/featuredArticles/</loc>
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-     <lastmod>2017-03-08</lastmod>
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      <changefreq>daily</changefreq>
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     </url>
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     <url>
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      <loc>https://guangchuangyu.github.io/ggtree/gallery/</loc>
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      <changefreq>daily</changefreq>
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     <url>
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      <loc>https://guangchuangyu.github.io/ggtree/ChIPseeker/</loc>
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      <changefreq>daily</changefreq>
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     </url>
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      <loc>https://guangchuangyu.github.io/ggtree/clusterProfiler/</loc>
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      <changefreq>daily</changefreq>
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     </url>
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     <url>
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      <loc>https://guangchuangyu.github.io/ggtree/DOSE/</loc>
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      <changefreq>daily</changefreq>
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      <loc>https://guangchuangyu.github.io/ggtree/emojifont/</loc>
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      <loc>https://guangchuangyu.github.io/ggtree/ggtree/</loc>
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      <loc>https://guangchuangyu.github.io/ggtree/GOSemSim/</loc>
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      <changefreq>daily</changefreq>
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      <loc>https://guangchuangyu.github.io/ggtree/meshes/</loc>
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      <changefreq>daily</changefreq>
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ggtree_sticker.R
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+library(ggbio)
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+library(biovizBase)
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+library(Homo.sapiens)
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+
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+library(TxDb.Hsapiens.UCSC.hg19.knownGene)
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+txdb <- TxDb.Hsapiens.UCSC.hg19.knownGene
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+
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+data(genesymbol, package = "biovizBase")
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+wh <- genesymbol[c("BRCA1", "NBR1")]
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+wh <- range(wh, ignore.strand = TRUE)
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+
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+gr.txdb <- crunch(txdb, which = wh)
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+## change column to  model
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+colnames(values(gr.txdb))[4] <- "model"
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+grl <- split(gr.txdb, gr.txdb$tx_id)
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+## fake some randome names
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+set.seed(2016-10-25)
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+names(grl) <- sample(LETTERS, size = length(grl), replace = TRUE)
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+
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+
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+## the random tree
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+
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+library(ggtree)
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+n <- names(grl) %>% unique %>% length
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+set.seed(2016-10-25)
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+tr <- rtree(n)
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+set.seed(2016-10-25)
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+tr$tip.label = sample(unique(names(grl)), n)
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+
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+p <- ggtree(tr, color='grey') + geom_tiplab(align=T, linesize=.05,
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+                                            linetype='dashed', size=1.2, color='grey')
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+
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+##  align the alignment with tree
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+p2 <- facet_plot(p, 'Alignment', grl, geom_alignment, inherit.aes=FALSE,
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+                 alpha=.6, size=.1, mapping=aes(), color='grey', extend.size=.1)
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+p2 <- p2 + theme_transparent() + theme(strip.text = element_blank())+xlim_tree(3.4)
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+
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+
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+#################################
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+library(hexSticker)
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+sticker(p2, package="ggtree", p_x=1, p_y=1.5, p_size=9, s_x=.85, s_y = .68, s_width=.95, s_height=.65,
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+        h_color="#2C3E50", h_fill="#2574A9", filename="docs/ggtree.png")
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+
logo.png
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mkdocs/docs/featuredArticles.md
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 [Let us know](https://github.com/GuangchuangYu/featured_img) if you have
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 published using `ggtree` and your publication will be featured here.
26 26
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-[![citation](https://img.shields.io/badge/cited%20by-8-blue.svg?style=flat)](https://scholar.google.com.hk/scholar?oi=bibs&hl=en&cites=7268358477862164627)
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+[![citation](https://img.shields.io/badge/cited%20by-9-blue.svg?style=flat)](https://scholar.google.com.hk/scholar?oi=bibs&hl=en&cites=7268358477862164627)
28 28 
 <link rel='stylesheet' href=https://guangchuangyu.github.io/resume/css/morris.css>
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 <script src='https://guangchuangyu.github.io/resume/css/jquery.min.js' type='text/javascript'></script>
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 <script src='https://guangchuangyu.github.io/resume/css/raphael-min.js' type='text/javascript'></script>
... ... 
@@ -38,13 +38,13 @@ published using `ggtree` and your publication will be featured here.
38 38 
     height: 300px;
39 39 
   }
40 40 
   </style>
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-<div id="chart8dfef1a8f3b" class="rChart morris">
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+<div id="chart576124eca87f" class="rChart morris">
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 </div>
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 <script type='text/javascript'>
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     var chartParams = {
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- "element": "chart8dfef1a8f3b",
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+ "element": "chart576124eca87f",
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 "width":            800,
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 "height":            400,
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 "xkey": "year",
... ... 
@@ -59,11 +59,11 @@ published using `ggtree` and your publication will be featured here.
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 },
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 {
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  "year": 2017,
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-"cites":              7,
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+"cites":              8,
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 "pubid": "HtEfBTGE9r8C"
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 }
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 ],
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-"id": "chart8dfef1a8f3b",
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+"id": "chart576124eca87f",
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 "labels": "cites"
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 },
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       chartType = "Bar"
mkdocs/docs/gallery.md
History View file @ 975ee523
... ... 
@@ -21,7 +21,7 @@ output:
21 21 
 <!-- AddToAny END -->
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 <link rel="stylesheet" href="https://guangchuangyu.github.io/css/font-awesome.min.css">
23 23
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-[![citation](https://img.shields.io/badge/cited%20by-8-blue.svg?style=flat)](https://scholar.google.com.hk/scholar?oi=bibs&hl=en&cites=7268358477862164627)
24 
+[![citation](https://img.shields.io/badge/cited%20by-9-blue.svg?style=flat)](https://scholar.google.com.hk/scholar?oi=bibs&hl=en&cites=7268358477862164627)
25 25
26 26 
 <!-- citation:=HtEfBTGE9r8C:=7268358477862164627 -->
27 27 
 <i class="fa fa-mortar-board"></i> Journal Articles
mkdocs/docs/index.md
History View file @ 975ee523
... ... 
@@ -22,15 +22,15 @@ ggtree: visualization and annotation of phylogenetic trees
22 22
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 <script async src="//static.addtoany.com/menu/page.js"></script>
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 <!-- AddToAny END -->
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-<img src="https://raw.githubusercontent.com/jotsetung/BioC-stickers/master/ggtree/ggtree.png" height="128", align="right" />
25 
+<img src="https://guangchuangyu.github.io/ggtree/ggtree.png" height="128", align="right" />
26 26
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 <link rel="stylesheet" href="https://guangchuangyu.github.io/css/font-awesome.min.css">
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 <link rel="stylesheet" href="https://guangchuangyu.github.io/css/academicons.min.css">
29 29
30 
-[![releaseVersion](https://img.shields.io/badge/release%20version-1.6.10-blue.svg?style=flat)](https://bioconductor.org/packages/ggtree)
31 
-[![develVersion](https://img.shields.io/badge/devel%20version-1.7.9-blue.svg?style=flat)](https://github.com/guangchuangyu/ggtree)
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-[![total](https://img.shields.io/badge/downloads-12364/total-blue.svg?style=flat)](https://bioconductor.org/packages/stats/bioc/ggtree)
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-[![month](https://img.shields.io/badge/downloads-932/month-blue.svg?style=flat)](https://bioconductor.org/packages/stats/bioc/ggtree)
30 
+[![](https://img.shields.io/badge/release%20version-1.6.10-blue.svg?style=flat)](https://bioconductor.org/packages/ggtree)
31 
+[![](https://img.shields.io/badge/devel%20version-1.7.10-blue.svg?style=flat)](https://github.com/guangchuangyu/ggtree)
32 
+[![](https://img.shields.io/badge/download-12746/total-blue.svg?style=flat)](https://bioconductor.org/packages/stats/bioc/ggtree)
33 
+[![](https://img.shields.io/badge/download-967/month-blue.svg?style=flat)](https://bioconductor.org/packages/stats/bioc/ggtree)
34 34
35 35 
 The `ggtree` package extending the *ggplot2* package. It based on
36 36 
 grammar of graphics and takes all the good parts of *ggplot2*. *ggtree*
... ... 
@@ -59,9 +59,9 @@ University of Hong Kong.
59 59
60 60 
 Please cite the following article when using `ggtree`:
61 61
62 
-[![doi](https://img.shields.io/badge/doi-10.1111/2041--210X.12628-blue.svg?style=flat)](http://dx.doi.org/10.1111/2041-210X.12628)
63 
-[![citation](https://img.shields.io/badge/cited%20by-8-blue.svg?style=flat)](https://scholar.google.com.hk/scholar?oi=bibs&hl=en&cites=7268358477862164627)
64 
-[![Altmetric](https://img.shields.io/badge/Altmetric-352-blue.svg?style=flat)](https://www.altmetric.com/details/10533079)
62 
+[![](https://img.shields.io/badge/doi-10.1111/2041--210X.12628-blue.svg?style=flat)](http://dx.doi.org/10.1111/2041-210X.12628)
63 
+[![citation](https://img.shields.io/badge/cited%20by-9-blue.svg?style=flat)](https://scholar.google.com.hk/scholar?oi=bibs&hl=en&cites=7268358477862164627)
64 
+[![](https://img.shields.io/badge/Altmetric-351-blue.svg?style=flat)](https://www.altmetric.com/details/10533079)
65 65
66 66 
 **G Yu**, DK Smith, H Zhu, Y Guan, TTY Lam<sup>\*</sup>. ggtree: an R
67 67 
 package for visualization and annotation of phylogenetic trees with
mkdocs/src/index.rmd
History View file @ 975ee523
... ... 
@@ -16,7 +16,7 @@ html_preview: false
16 16 
 library("ypages")
17 17 
 ```
18 18
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-<img src="https://raw.githubusercontent.com/jotsetung/BioC-stickers/master/ggtree/ggtree.png" height="128", align="right" />
19 
+<img src="https://guangchuangyu.github.io/ggtree/ggtree.png" height="128", align="right" />
20 20
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 <link rel="stylesheet" href="https://guangchuangyu.github.io/css/font-awesome.min.css">
22 22 
 <link rel="stylesheet" href="https://guangchuangyu.github.io/css/academicons.min.css">