... | ... |
@@ -64,7 +64,7 @@ School of Basic Medical Sciences, Southern Medical University |
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If you use `r Biocpkg('ggtree')` in published research, please cite the most appropriate paper(s) from this list: |
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|
67 |
-1. S Xu, L Li, X Luo, M Chen, W Tang, L Zhan, Z Dai, TT. Lam, Y Guan, __G Yu__. Ggtree: A serialized data object for visualization of a phylogenetic tree and annotation data. __*iMeta*__, 2022, 4(1):e56. doi: [10.1002/imt2.56](https://doi.org/10.1002/imt2.56). |
|
67 |
+1. S Xu, L Li, X Luo, M Chen, W Tang, L Zhan, Z Dai, TT. Lam, Y Guan, __G Yu__. Ggtree: A serialized data object for visualization of a phylogenetic tree and annotation data. __*iMeta*__, 2022, 1(4):e56. doi: [10.1002/imt2.56](https://doi.org/10.1002/imt2.56). |
|
68 | 68 |
2. __G Yu__. Using ggtree to visualize data on tree-like structures. __*Current Protocols in Bioinformatics*__, 2020, 69:e96. doi: [10.1002/cpbi.96](https://doi.org/10.1002/cpbi.96). |
69 | 69 |
- [Source code and data to reproduce figures in the article](https://github.com/GuangchuangYu/ggtree-current-protocols) |
70 | 70 |
3. __G Yu__^\*^, TTY Lam, H Zhu, Y Guan^\*^. Two methods for mapping and visualizing associated data on phylogeny using ggtree. __*Molecular Biology and Evolution*__, 2018, 35(2):3041-3043. |
... | ... |
@@ -12,7 +12,7 @@ |
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<!-- |
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[](http://www.repostatus.org/#active) |
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[](https://www.bioconductor.org/packages/devel/bioc/html/ggtree.html#since) |
15 |
-[](https://github.com/GuangchuangYu/ggtree/commits/master) |
|
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+[](https://github.com/GuangchuangYu/ggtree/commits/master) |
|
16 | 16 |
|
17 | 17 |
` r badge_devel("guangchuangyu/ggtree", "green")` |
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` r badge_bioc_download("ggtree", "total", "blue")` |
... | ... |
@@ -45,7 +45,7 @@ list: |
45 | 45 |
|
46 | 46 |
1. S Xu, L Li, X Luo, M Chen, W Tang, L Zhan, Z Dai, TT. Lam, Y Guan, |
47 | 47 |
**G Yu**. Ggtree: A serialized data object for visualization of a |
48 |
- phylogenetic tree and annotation data. ***iMeta***, 2022, 4(1):e56. |
|
48 |
+ phylogenetic tree and annotation data. ***iMeta***, 2022, 1(4):e56. |
|
49 | 49 |
doi: [10.1002/imt2.56](https://doi.org/10.1002/imt2.56). |
50 | 50 |
2. **G Yu**. Using ggtree to visualize data on tree-like structures. |
51 | 51 |
***Current Protocols in Bioinformatics***, 2020, 69:e96. doi: |
... | ... |
@@ -14,24 +14,6 @@ citEntry( |
14 | 14 |
"Chapman and Hall/CRC. doi:10.1201/9781003279242") |
15 | 15 |
) |
16 | 16 |
|
17 |
- |
|
18 |
-citEntry( |
|
19 |
- entry = "article", |
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20 |
- title = "Using ggtree to Visualize Data on Tree-Like Structures", |
|
21 |
- author = person("Guangchuang", "Yu"), |
|
22 |
- year = "2020", |
|
23 |
- journal = "Current Protocols in Bioinformatics", |
|
24 |
- volume = "69", |
|
25 |
- pages = "e96", |
|
26 |
- number = "1", |
|
27 |
- url = "https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.96", |
|
28 |
- doi = "10.1002/cpbi.96", |
|
29 |
- textVersion = paste("Guangchuang Yu.", |
|
30 |
- "Using ggtree to visualize data on tree-like structures.", |
|
31 |
- "Current Protocols in Bioinformatics, 2020, 69:e96. doi: 10.1002/cpbi.96") |
|
32 |
-) |
|
33 |
- |
|
34 |
- |
|
35 | 17 |
citEntry( |
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entry = "article", |
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title = "Ggtree: A serialized data object for visualization of a phylogenetic tree and annotation data", |
... | ... |
@@ -49,8 +31,8 @@ citEntry( |
49 | 31 |
), |
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year = "2022", |
51 | 33 |
journal = "iMeta", |
52 |
- volume = "4", |
|
53 |
- number = "1", |
|
34 |
+ volume = "1", |
|
35 |
+ number = "4", |
|
54 | 36 |
pages = "e56", |
55 | 37 |
doi = "10.1002/imt2.56", |
56 | 38 |
textVersion = paste("Shuangbin Xu, Lin Li, Xiao Luo, Meijun Chen, Wenli Tang, Li Zhan, Zehan Dai, Tommy T. Lam, Yi Guan, Guangchuang Yu.", |
... | ... |
@@ -59,6 +41,23 @@ citEntry( |
59 | 41 |
) |
60 | 42 |
|
61 | 43 |
|
44 |
+citEntry( |
|
45 |
+ entry = "article", |
|
46 |
+ title = "Using ggtree to Visualize Data on Tree-Like Structures", |
|
47 |
+ author = person("Guangchuang", "Yu"), |
|
48 |
+ year = "2020", |
|
49 |
+ journal = "Current Protocols in Bioinformatics", |
|
50 |
+ volume = "69", |
|
51 |
+ pages = "e96", |
|
52 |
+ number = "1", |
|
53 |
+ url = "https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.96", |
|
54 |
+ doi = "10.1002/cpbi.96", |
|
55 |
+ textVersion = paste("Guangchuang Yu.", |
|
56 |
+ "Using ggtree to visualize data on tree-like structures.", |
|
57 |
+ "Current Protocols in Bioinformatics, 2020, 69:e96. doi: 10.1002/cpbi.96") |
|
58 |
+) |
|
59 |
+ |
|
60 |
+ |
|
62 | 61 |
citEntry( |
63 | 62 |
entry = "article", |
64 | 63 |
title = "Two methods for mapping and visualizing associated data on phylogeny using ggtree.", |