... | ... |
@@ -28,6 +28,7 @@ library("yyplot") |
28 | 28 |
[](https://saythanks.io/to/GuangchuangYu) |
29 | 29 |
|
30 | 30 |
|
31 |
+[](https://www.bioconductor.org/packages/devel/bioc/html/ggtree.html#archives) |
|
31 | 32 |
[](http://www.repostatus.org/#active) |
32 | 33 |
[](https://codecov.io/gh/GuangchuangYu/ggtree) |
33 | 34 |
[)`-green.svg)](https://github.com/GuangchuangYu/ggtree/commits/master) |
... | ... |
@@ -35,13 +36,6 @@ library("yyplot") |
35 | 36 |
[](https://github.com/GuangchuangYu/ggtree/stargazers) |
36 | 37 |
|
37 | 38 |
|
38 |
-[](https://www.bioconductor.org/packages/devel/bioc/html/ggtree.html#archives) |
|
39 |
-[](https://bioconductor.org/checkResults/devel/bioc-LATEST/ggtree/) |
|
40 |
-[](https://travis-ci.org/GuangchuangYu/ggtree) |
|
41 |
-[](https://ci.appveyor.com/project/GuangchuangYu/ggtree) |
|
42 |
-[](#backers) |
|
43 |
-[](#sponsors) |
|
44 |
- |
|
45 | 39 |
|
46 | 40 |
The `ggtree` package extending the `ggplot2` package. It based on grammar of graphics and takes all the good parts of `ggplot2`. `ggtree` is designed for not only viewing phylogenetic tree but also displaying annotation data on the tree. |
47 | 41 |
|
... | ... |
@@ -102,34 +96,6 @@ ggsave(p, file="docs/images/dlstats.png", width=8, height=4) |
102 | 96 |
|
103 | 97 |
<img src="docs/images/dlstats.png" width="890"/> |
104 | 98 |
|
105 |
-## Contributors |
|
106 |
- |
|
107 |
-This project exists thanks to all the people who contribute. [[Contribute]](CONTRIBUTING.md). |
|
108 |
-<a href="https://github.com/GuangchuangYu/ggtree/graphs/contributors"><img src="https://opencollective.com/ggtree/contributors.svg?width=890" /></a> |
|
109 |
- |
|
110 |
- |
|
111 |
-## Backers |
|
112 |
- |
|
113 |
-Thank you to all our backers! 🙏 [[Become a backer](https://opencollective.com/ggtree#backer)] |
|
114 |
- |
|
115 |
-<a href="https://opencollective.com/ggtree#backers" target="_blank"><img src="https://opencollective.com/ggtree/backers.svg?width=890"></a> |
|
116 |
- |
|
117 |
- |
|
118 |
-## Sponsors |
|
119 |
- |
|
120 |
-Support this project by becoming a sponsor. Your logo will show up here with a link to your website. [[Become a sponsor](https://opencollective.com/ggtree#sponsor)] |
|
121 |
- |
|
122 |
- |
|
123 |
-<a href="https://opencollective.com/ggtree/sponsor/0/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/0/avatar.svg"></a> |
|
124 |
-<a href="https://opencollective.com/ggtree/sponsor/1/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/1/avatar.svg"></a> |
|
125 |
-<a href="https://opencollective.com/ggtree/sponsor/2/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/2/avatar.svg"></a> |
|
126 |
-<a href="https://opencollective.com/ggtree/sponsor/3/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/3/avatar.svg"></a> |
|
127 |
-<a href="https://opencollective.com/ggtree/sponsor/4/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/4/avatar.svg"></a> |
|
128 |
-<a href="https://opencollective.com/ggtree/sponsor/5/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/5/avatar.svg"></a> |
|
129 |
-<a href="https://opencollective.com/ggtree/sponsor/6/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/6/avatar.svg"></a> |
|
130 |
-<a href="https://opencollective.com/ggtree/sponsor/7/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/7/avatar.svg"></a> |
|
131 |
-<a href="https://opencollective.com/ggtree/sponsor/8/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/8/avatar.svg"></a> |
|
132 |
-<a href="https://opencollective.com/ggtree/sponsor/9/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/9/avatar.svg"></a> |
|
133 | 99 |
|
134 | 100 |
|
135 | 101 |
|
... | ... |
@@ -6,9 +6,7 @@ ggtree: an R package for visualization and annotation of phylogenetic trees with |
6 | 6 |
|
7 | 7 |
[](https://bioconductor.org/packages/ggtree) [](https://github.com/guangchuangyu/ggtree) [](https://www.bioconductor.org/packages/devel/bioc/html/ggtree.html#since) [](https://awesome-r.com/#awesome-r-graphic-displays) [](https://saythanks.io/to/GuangchuangYu) |
8 | 8 |
|
9 |
-[](http://www.repostatus.org/#active) [](https://codecov.io/gh/GuangchuangYu/ggtree) [](https://github.com/GuangchuangYu/ggtree/commits/master) [](https://github.com/GuangchuangYu/ggtree/network) [](https://github.com/GuangchuangYu/ggtree/stargazers) |
|
10 |
- |
|
11 |
-[](https://www.bioconductor.org/packages/devel/bioc/html/ggtree.html#archives) [](https://bioconductor.org/checkResults/devel/bioc-LATEST/ggtree/) [](https://travis-ci.org/GuangchuangYu/ggtree) [](https://ci.appveyor.com/project/GuangchuangYu/ggtree) [](#backers) [](#sponsors) |
|
9 |
+[](https://www.bioconductor.org/packages/devel/bioc/html/ggtree.html#archives) [](http://www.repostatus.org/#active) [](https://codecov.io/gh/GuangchuangYu/ggtree) [](https://github.com/GuangchuangYu/ggtree/commits/master) [](https://github.com/GuangchuangYu/ggtree/network) [](https://github.com/GuangchuangYu/ggtree/stargazers) |
|
12 | 10 |
|
13 | 11 |
The `ggtree` package extending the `ggplot2` package. It based on grammar of graphics and takes all the good parts of `ggplot2`. `ggtree` is designed for not only viewing phylogenetic tree but also displaying annotation data on the tree. |
14 | 12 |
|
... | ... |
@@ -40,22 +38,3 @@ Please cite the following article when using `ggtree`: |
40 | 38 |
[](https://bioconductor.org/packages/stats/bioc/ggtree) [](https://bioconductor.org/packages/stats/bioc/ggtree) [](https://bioconductor.org/packages/stats/bioc/ggtree) |
41 | 39 |
|
42 | 40 |
<img src="docs/images/dlstats.png" width="890"/> |
43 |
- |
|
44 |
-Contributors |
|
45 |
- |
|
46 |
-This project exists thanks to all the people who contribute. [\[Contribute\]](CONTRIBUTING.md). <a href="https://github.com/GuangchuangYu/ggtree/graphs/contributors"><img src="https://opencollective.com/ggtree/contributors.svg?width=890" /></a> |
|
47 |
- |
|
48 |
-Backers |
|
49 |
- |
|
50 |
-Thank you to all our backers! 🙏 \[[Become a backer](https://opencollective.com/ggtree#backer)\] |
|
51 |
- |
|
52 |
-<a href="https://opencollective.com/ggtree#backers" target="_blank"><img src="https://opencollective.com/ggtree/backers.svg?width=890"></a> |
|
53 |
- |
|
54 |
-Sponsors |
|
55 |
- |
|
56 |
-Support this project by becoming a sponsor. Your logo will show up here with a link to your website. \[[Become a sponsor](https://opencollective.com/ggtree#sponsor)\] |
|
57 |
- |
|
58 |
-<a href="https://opencollective.com/ggtree/sponsor/0/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/0/avatar.svg"></a> <a href="https://opencollective.com/ggtree/sponsor/1/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/1/avatar.svg"></a> <a href="https://opencollective.com/ggtree/sponsor/2/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/2/avatar.svg"></a> <a href="https://opencollective.com/ggtree/sponsor/3/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/3/avatar.svg"></a> <a href="https://opencollective.com/ggtree/sponsor/4/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/4/avatar.svg"></a> <a href="https://opencollective.com/ggtree/sponsor/5/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/5/avatar.svg"></a> <a href="https://opencollective.com/ggtree/sponsor/6/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/6/avatar.svg"></a> <a href="https://opencollective.com/ggtree/sponsor/7/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/7/avatar.svg"></a> <a href="https://opencollective.com/ggtree/sponsor/8/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/8/avatar.svg"></a> <a href="https://opencollective.com/ggtree/sponsor/9/website" target="_blank"><img src="https://opencollective.com/ggtree/sponsor/9/avatar.svg"></a> |