Browse code

ggtree object

guangchuang yu authored on 08/12/2016 11:25:11
Showing 1 changed files

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@@ -1,7 +1,7 @@
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 setOldClass("phylo")
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 setOldClass("multiPhylo")
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-setOldClass("gg")
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-setOldClass("ggplot")
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+setOldClass("ggtree")
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+
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 setClassUnion("phyloOrmultiPhylo", c("phylo", "multiPhylo"))
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@@ -15,7 +15,7 @@ supported_tree_object <- function() {
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       "jplace",
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       "nhx",
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       "paml_rst",
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-      "phangorn",      
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+      "phangorn",
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       "phylip",
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       "r8s",
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       "raxml")
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@@ -50,7 +50,7 @@ setClass("apeBootstrap",
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 ##' @name beast-class
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 ##' @aliases beast-class
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 ##'      get.tree,beast-method
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-##' 
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+##'
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 ##' @docType class
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 ##' @slot fields beast statistic variables
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 ##' @slot treetext tree text in beast file
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@@ -114,7 +114,7 @@ setClass("codeml_mlc",
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 ##' @aliases paml_rst-class
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 ##'   set.subs,paml_rst-method
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 ##'   set.subs<-,paml_rst-method
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-##' 
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+##'
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 ##' @docType class
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 ##' @slot fields availabel attributes
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 ##' @slot treetext tree text