@@ -2,7 +2,7 @@

 .onAttach <- function(libname, pkgname) {

     pkgVersion <- packageDescription(pkgname, fields="Version")

     msg <- paste0(pkgname, " v", pkgVersion, "  ",

-                  "For help: https://guangchuangyu.github.io/", pkgname, "\n\n")

+                  "For help: https://guangchuangyu.github.io/software/", pkgname, "\n\n")

     citation <- paste0("If you use ", pkgname, " in published research, please cite:\n",

                   "Guangchuang Yu, David Smith, Huachen Zhu, Yi Guan, Tommy Tsan-Yuk Lam. ",

@@ -228,7 +228,7 @@ the [Tree Annotation](treeAnnotation.html) vignette.

 + [Annotate a phylogenetic tree with insets](https://guangchuangyu.github.io/software/ggtree/vignettes/ggtree-inset.html)

-**ggtree homepage**: <https://guangchuangyu.github.io/ggtree> (contains more

+**ggtree homepage**: <https://guangchuangyu.github.io/software/ggtree> (contains more

 information about the package, more documentation, a gallery of beautiful

 published images and links to related resources).

@@ -276,7 +276,7 @@ it also supports *image* geom to label tip with image files. A corresponding

 geom, `geom_nodelab` is also provided for displaying node labels. For details of

 label nodes with images, please refer to

 the vignette,

-[Annotating phylogenetic tree with images](https://guangchuangyu.github.io/ggtree/vignettes/ggtree-ggimage.html).

+[Annotating phylogenetic tree with images](https://guangchuangyu.github.io/software/ggtree/vignettes/ggtree-ggimage.html).