% Generated by roxygen2: do not edit by hand % Please edit documentation in R/paml.R \name{mask} \alias{mask} \title{mask} \usage{ mask(tree_object, field, site, mask_site = FALSE) } \arguments{ \item{tree_object}{tree object} \item{field}{selected field} \item{site}{site} \item{mask_site}{if TRUE, site will be masked. if FALSE, selected site will not be masked, while other sites will be masked.} } \value{ updated tree object } \description{ site mask } \author{ Guangchuang Yu }