% Generated by roxygen2: do not edit by hand % Please edit documentation in R/AllGenerics.R, R/NHX.R, R/RAxML.R, R/ape.R, R/beast.R, R/codeml.R, R/codeml_mlc.R, R/hyphy.R, R/jplace.R, R/paml_rst.R, R/phangorn.R, R/r8s.R \docType{methods} \name{get.fields} \alias{get.fields} \alias{get.fields,apeBootstrap-method} \alias{get.fields,beast-method} \alias{get.fields,codeml-method} \alias{get.fields,codeml_mlc-method} \alias{get.fields,hyphy-method} \alias{get.fields,jplace,ANY-method} \alias{get.fields,nhx-method} \alias{get.fields,paml_rst-method} \alias{get.fields,phangorn-method} \alias{get.fields,r8s-method} \alias{get.fields,raxml-method} \title{get.fields method} \usage{ get.fields(object, ...) \S4method{get.fields}{nhx}(object, ...) \S4method{get.fields}{raxml}(object, ...) \S4method{get.fields}{apeBootstrap}(object, ...) \S4method{get.fields}{beast}(object, ...) \S4method{get.fields}{codeml}(object, ...) \S4method{get.fields}{codeml_mlc}(object) \S4method{get.fields}{hyphy}(object, ...) get.fields(object, ...) \S4method{get.fields}{paml_rst}(object) \S4method{get.fields}{phangorn}(object, ...) \S4method{get.fields}{r8s}(object, ...) } \arguments{ \item{object}{one of \code{jplace}, \code{beast}, \code{hyphy}, \code{codeml}, \code{codeml_mlc}, \code{paml_rst} object} \item{...}{additional parameter} } \value{ available annotation variables } \description{ get.fields method } \examples{ jp <- system.file("extdata", "sample.jplace", package="ggtree") jp <- read.jplace(jp) get.fields(jp) } \author{ Guangchuang Yu \url{http://ygc.name} }