ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
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 The `ggtree` package extending the `ggplot2` package. It based on grammar of graphics and takes all the good parts of `ggplot2`. `ggtree` is designed for not only viewing phylogenetic tree but also displaying annotation data on the tree.
 

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 Please cite the following article when using `ggtree`:
 
 **G Yu**, DK Smith, H Zhu, Y Guan, TTY Lam<sup>\*</sup>. ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data. ***Methods in Ecology and Evolution***. *accepted*
 

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 For details, please visit our project website, <https://guangchuangyu.github.io/ggtree>.
 
 -   [Documentation](https://guangchuangyu.github.io/ggtree/documentation/)
 -   [FAQ](https://guangchuangyu.github.io/ggtree/faq/)
 -   [Featured Articles](https://guangchuangyu.github.io/ggtree/featuredArticles/)
 -   [Feedback](https://guangchuangyu.github.io/ggtree/#feedback)
 

 ### Citation
 
 [![citation](https://img.shields.io/badge/cited%20by-1-green.svg?style=flat)](https://scholar.google.com.hk/scholar?oi=bibs&hl=en&cites=7268358477862164627)
 

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 ### Download stats
 

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