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Package: ggtree
Type: Package
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Title: an R package for visualization of tree and annotation data
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Version: 3.7.0
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Authors@R: c(
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person("Guangchuang", "Yu", email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
comment = c(ORCID = "0000-0002-6485-8781")),
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person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com", role = c("aut", "ths")),
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person("Shuangbin", "Xu", email = "xshuangbin@163.com", role = "aut",
comment = c(ORCID="0000-0003-3513-5362")),
person("Lin", " Li", email = "williamlee2220@qq.com", role = "ctb"),
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person("Bradley", "Jones", email = "bjones@cfenet.ubc.ca", role = "ctb"),
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person("Justin", "Silverman", email = "jsilve24@gmail.com", role = "ctb"),
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person("Watal M.", "Iwasaki", email = "heavy.watal@gmail.com", role = "ctb"),
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person("Yonghe", "Xia", email = "xiayh17@gmail.com", role = "ctb"),
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person("Ruizhu", "Huang", email = "ruizhuRH@gmail.com", role = "ctb")
)
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Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
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Description: 'ggtree' extends the 'ggplot2' plotting system which implemented
the grammar of graphics. 'ggtree' is designed for visualization and annotation
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of phylogenetic trees and other tree-like structures with their annotation data.
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Depends:
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R (>= 3.5.0)
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Imports:
ape,
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aplot,
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dplyr,
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ggplot2 (>= 3.0.0),
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grid,
magrittr,
methods,
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purrr,
rlang,
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ggfun (>= 0.0.6),
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yulab.utils,
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tidyr,
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tidytree (>= 0.3.9),
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treeio (>= 1.8.0),
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utils,
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scales,
stats
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Suggests:
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emojifont,
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ggimage,
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ggplotify,
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shadowtext,
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grDevices,
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knitr,
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prettydoc,
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rmarkdown,
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testthat,
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tibble,
glue
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Remotes:
GuangchuangYu/treeio
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VignetteBuilder: knitr
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ByteCompile: true
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Encoding: UTF-8
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License: Artistic-2.0
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URL: https://www.amazon.com/Integration-Manipulation-Visualization-Phylogenetic-Computational-ebook/dp/B0B5NLZR1Z/ (book), http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12628 (paper)
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BugReports: https://github.com/YuLab-SMU/ggtree/issues
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Packaged: 2014-12-03 08:16:14 UTC; root
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biocViews: Alignment, Annotation, Clustering, DataImport,
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MultipleSequenceAlignment, Phylogenetics, ReproducibleResearch, Software, Visualization
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RoxygenNote: 7.2.1
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Roxygen: list(markdown = TRUE)
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