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## Package The `genbankr` package is part of the Bioconductor ecosystem of R packages. As such, it's primary splash page - including continuous integration and testing badges - can be found [here]( ## Introduction `genbankr` is a package which provides utilities to parse GenBank and GenPept files into data structures which integrate with the Bioconductor ecosystem. ## Installation This package depends on the [Bioconductor]( ecosystem of R packages. If you already have a version of Bioconductor (>=3.3) installed, you can do gthe following: ``` libary(BiocManager) BiocManager::install("genbankr") ``` If you do not currently have the Bioconductor core machinery installed, you can get the current or release version like so: ``` if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") ``` for release and ``` if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install(version = "devel") ``` For devel. After doing one of the above (once), you can install `genbankr` as above, via ``` library(BiocManager) BiocManager::install("genbankr") ``` Note that Bioconductor is a sychronized development and release platform, so release and development versions of Bioconductor packages cannot be safely mixed in the same package (installation) library. Use `switchr` or direct `.libPaths` management to maintain multiple side-by-side installations if necessary. To install directly from github (this will generally not be necessary unless you intend to contribute to `genbankr`'s development), do ``` if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install(version = "devel") BiocManager::install("gmbecker/genbankr") ``` The Bioconductor development repository will contain the latest development version of genbankr which has passed testing (lagged by about a day). ## Code of Conduct This project operates under the Contributor Covenenant Code of Coduct [see here](./ ## Package Affiliations The `genbankr` package is a part of the Bioconductor and rOpenSci projects. | [![bioconductor_footer](]( | [![ropensci_footer](]( | |:-------------------------------------------------------------------------------------------------------:|:----------------------------------------------------------------------------------------------:|